| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1431721 | 187 (0.950) | 15 (0.080) | 7/264 | NT | 7.1% | coding (158/336 nt) | PP_1253 | ArsR family transcriptional regulator |
| ? | NC_002947 | = 1431746 | 211 (1.120) | coding (133/336 nt) | PP_1253 | ArsR family transcriptional regulator | |||||
CAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1431567‑1431721‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgc‑‑cacCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGAGCTGGATGGAGGTCGGCCGAAGTCGAGCATGTCCCACCACTTCCGTGTGTTGCGTGATGCAGGGCTGGTGCAAACCCGCAATGTGGGGACTACCCATATGAATTCGCTGCGTAGCG < NC_002947/1431746‑1431599 CAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTC > 1:272651/1‑150CAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTC < 2:2443567/150‑1 AGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCG < 1:763678/150‑1 GCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CAC > 1:1590551/1‑150 CTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACACCTGGCCGGCGTGGCCGAGGCCAG < 2:1618247/150‑1 GCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACCCGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTG < 2:1580984/150‑1 GCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACACCTGGCCGGCGTGGCCGAGGCCAGCTG < 2:1881623/150‑1 GCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACACCTGGCCGGCGTGGCCGAGGCCAGCTG < 2:792738/150‑1 GCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACACCTGGCCGGCGTGGCCGAGGCCAGCTG < 2:792320/150‑1 GCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTG < 2:2358366/150‑1 GCTACGCAGCGAATTCATATGGGTAGTCCCCACAGTGCGGGTTTGCACCAGCCCTGCATCACGCAACACCCGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTG < 2:3856798/150‑1 CTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCAGCCGACCTCCATCCAGCTCGCCACACCTGGCCGGCGTGGCCGAGGCCAGCTGT < 2:2283002/150‑1 TACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGCCACACCTGGCCGGCGTGGCCGAGGCCAGCTGTG < 2:826509/150‑1 CGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGA < 1:9904/150‑1 CGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGA < 1:2361999/150‑1 CATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGAGCTGGATGGAG < 1:149558/150‑1 CATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGAGCTGGATGGAG < 2:3771730/150‑1 ACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGA > 2:1774313/1‑85 ACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGA < 1:1774313/85‑1 CGC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGAGCTGGATGGAGGTCGGCCGAAGTCGAGCATGTCCCACCACTTCCGTGTGTTGCGTGATGCAGGGCTGGTGCAAACCCGCACTGTGGGGACTACCCATATGAATTCGCTGCGT > 2:3789014/1‑150 GC‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGAGCTGGATAGAGGTCGGCCGAAGTCGAGCATGTCCCACCACTTCCGTGTGTTGCGTGATGCAGGGCTGGTGCAAACCCGCAATGTGGGGACTACCCATATGAATTCGCTGCGTA > 2:1218020/1‑150 C‑‑CACCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGAGCTGGATGGAGGTCGGCCGAAGTCGAGCATGTCCCACCACTTCCGTGTGTTGCGTGATGCAGGGCTGGTGCAAACCCGCAATGTGGGGACTACCCATATGAATTCGCTGCGTAG > 1:4150528/1‑150 C‑‑CACCTGGCCGGCGTGGCCGAGGCCAG‑‑GTGGCGAGCTGGATGGAGGTCGGCCGAAGTCGAGCATGTCCCACCACTTCCGTGTGTTGCGTGATGCAGGGCTGGTGCAAACCCGCAATGTGGGGACTACCCATATGAATTCGCTGCGTAGCG > 2:2040346/1‑150 CACCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGAGCTGGATGGAGGTCGGCCGAAGTCGAGCATGTCCCACCACTTCCGTGTGTTGCGTGATGCAGGGCTGGTGCAAACCCGCAATGTGGGGACTACCCATATGAATTCGCTGCGTAGC > 2:4034842/1‑150 CAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGCTCGC‑‑CAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1431567‑1431721‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgc‑‑cacCTGGCCGGCGTGGCCGAGGCCAGCTGTGGCGAGCTGGATGGAGGTCGGCCGAAGTCGAGCATGTCCCACCACTTCCGTGTGTTGCGTGATGCAGGGCTGGTGCAAACCCGCAATGTGGGGACTACCCATATGAATTCGCTGCGTAGCG < NC_002947/1431746‑1431599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |