New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4164667 =34 (1.110)7 (0.250) 3/122 2.7 21.7% coding (1029/1845 nt) btuB vitamin B12/cobalamin outer membrane transporter
?NC_000913 4164716 = 19 (0.670)coding (1078/1845 nt) btuB vitamin B12/cobalamin outer membrane transporter

CTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACG  >  NC_000913/4164660‑4164779
                                                        |                                                               
cTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGAcc                                                      >  2:952209/1‑68 (MQ=255)
   cgacgCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCggg                                                   <  1:78870/68‑1 (MQ=255)
     acgCCGGGTACAGGTTATGTTGAGGATGGATATGATCAGCGTAATACCGGCATCTATCTGACCGGGCt                                                 >  2:1127192/1‑68 (MQ=255)
                 cgttgatcatatccatcctcaacataccctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCgg                                     >  2:93369‑M2/40‑68 (MQ=255)
                 cgttgatcatatccatcctcaacataacctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCgg                                     >  2:94822‑M2/40‑68 (MQ=255)
                  gttgatcatatccatcctcaacataacctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCGGc                                    >  2:850426‑M2/39‑68 (MQ=255)
                  gttgatcatatccatcctcaacataacctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCGGc                                    >  2:200678‑M2/39‑68 (MQ=255)
                  gTTATGTAGAGGATGGATAAGATCAACGTATTAAAGGCATCAATCAGACCGGGCTGCAACTAGTCgga                                    >  1:1044790/1‑67 (MQ=255)
                   ttATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCg                                   >  2:569110/1‑68 (MQ=255)
                      tGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGAtt                                >  2:73638/1‑68 (MQ=255)
                        ttGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGCGCGGGCTGCAACAAGTCGGCGAttgt                              >  2:124322/1‑66 (MQ=255)
                        ttGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGAtttt                              >  1:1058122/1‑68 (MQ=255)
                        ttGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGAtttt                              >  1:177321/1‑68 (MQ=255)
                        ttGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGAtttt                              >  2:1109156/1‑68 (MQ=255)
                              atggatATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCttt                        >  1:422295/1‑68 (MQ=255)
                                 gatATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGaa                     <  2:691590/68‑1 (MQ=255)
                                   tatGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAgg                   >  1:863290/1‑68 (MQ=255)
                                   tatGATCAACGTAATACCGGAATCTATCTGAACGGGCTGCAACAAGTCGGCGATTTTACCTTTGACgg                   >  1:1022584/1‑68 (MQ=255)
                                    atGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGgc                  <  2:630196/68‑1 (MQ=255)
                                        tCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCgcag              >  2:670901/1‑68 (MQ=255)
                                        ataacctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCgcag              <  1:200678‑M2/52‑1 (MQ=255)
                                        ataacctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCgcag              <  1:94822‑M2/52‑1 (MQ=255)
                                        ataacctgtacccggcAGCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCgcag              <  1:93369‑M2/52‑1 (MQ=255)
                                             gTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGc         >  1:503082/1‑68 (MQ=255)
                                             gTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGc         >  1:605109/1‑68 (MQ=255)
                                                aTACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGt      <  2:863287/68‑1 (MQ=255)
                                                   ccggcATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGAc   >  1:575338‑M2/6‑68 (MQ=255)
                                                    cggcATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACg  <  2:575338‑M2/64‑1 (MQ=255)
                                                    cggcATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACg  <  1:1127197‑M2/64‑1 (MQ=255)
                                                        |                                                               
CTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACG  >  NC_000913/4164660‑4164779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.