New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 4164667 = | 34 (1.110) | 7 (0.250) | 3/122 | 2.7 | 21.7% | coding (1029/1845 nt) | btuB | vitamin B12/cobalamin outer membrane transporter |
? | NC_000913 | 4164716 = | 19 (0.670) | coding (1078/1845 nt) | btuB | vitamin B12/cobalamin outer membrane transporter |
CTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACG > NC_000913/4164660‑4164779 | cTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGAcc > 2:952209/1‑68 (MQ=255) cgacgCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCggg < 1:78870/68‑1 (MQ=255) acgCCGGGTACAGGTTATGTTGAGGATGGATATGATCAGCGTAATACCGGCATCTATCTGACCGGGCt > 2:1127192/1‑68 (MQ=255) cgttgatcatatccatcctcaacataccctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCgg > 2:93369‑M2/40‑68 (MQ=255) cgttgatcatatccatcctcaacataacctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCgg > 2:94822‑M2/40‑68 (MQ=255) gttgatcatatccatcctcaacataacctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCGGc > 2:850426‑M2/39‑68 (MQ=255) gttgatcatatccatcctcaacataacctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCGGc > 2:200678‑M2/39‑68 (MQ=255) gTTATGTAGAGGATGGATAAGATCAACGTATTAAAGGCATCAATCAGACCGGGCTGCAACTAGTCgga > 1:1044790/1‑67 (MQ=255) ttATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCg > 2:569110/1‑68 (MQ=255) tGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGAtt > 2:73638/1‑68 (MQ=255) ttGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGCGCGGGCTGCAACAAGTCGGCGAttgt > 2:124322/1‑66 (MQ=255) ttGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGAtttt > 1:1058122/1‑68 (MQ=255) ttGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGAtttt > 1:177321/1‑68 (MQ=255) ttGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGAtttt > 2:1109156/1‑68 (MQ=255) atggatATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCttt > 1:422295/1‑68 (MQ=255) gatATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGaa < 2:691590/68‑1 (MQ=255) tatGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAgg > 1:863290/1‑68 (MQ=255) tatGATCAACGTAATACCGGAATCTATCTGAACGGGCTGCAACAAGTCGGCGATTTTACCTTTGACgg > 1:1022584/1‑68 (MQ=255) atGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGgc < 2:630196/68‑1 (MQ=255) tCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCgcag > 2:670901/1‑68 (MQ=255) ataacctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCgcag < 1:200678‑M2/52‑1 (MQ=255) ataacctgtacccggcATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCgcag < 1:94822‑M2/52‑1 (MQ=255) ataacctgtacccggcAGCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCgcag < 1:93369‑M2/52‑1 (MQ=255) gTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGc > 1:503082/1‑68 (MQ=255) gTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGc > 1:605109/1‑68 (MQ=255) aTACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGt < 2:863287/68‑1 (MQ=255) ccggcATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGAc > 1:575338‑M2/6‑68 (MQ=255) cggcATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACg < 2:575338‑M2/64‑1 (MQ=255) cggcATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACg < 1:1127197‑M2/64‑1 (MQ=255) | CTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACG > NC_000913/4164660‑4164779 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |