| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2077808 = | 31 (1.010) | 10 (0.400) | 4/108 | 2.1 | 21.0% | coding (240/375 nt) | cbtA | CP4‑44 prophage; toxin of the YeeV‑YeeU toxin‑antitoxin system |
| ? | NC_000913 | 2077982 = | 50 (2.000) | pseudogene (43/168 nt) | yeeW | CP4‑44 prophage; uncharacterized protein;Phage or Prophage Related | |||||
CCCTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCACTGAACTGATTAATAAGGCCGC > NC_000913/2077915‑2078046 | cccTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTgg < 1:475494/68‑1 (MQ=255)cccTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTgg < 1:916914/68‑1 (MQ=255)cccTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTgg < 2:1076449/68‑1 (MQ=255) ccTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGa > 1:1030122/1‑68 (MQ=255) ccTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGa > 1:852340/1‑68 (MQ=255) ccTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGa > 2:209309/1‑68 (MQ=255) ccTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGa > 2:509062/1‑68 (MQ=255) ccTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGa > 2:573919/1‑68 (MQ=255) ccTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGa > 1:1080311/1‑68 (MQ=255) ccTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGa > 2:921770/1‑68 (MQ=255) ccTGGGTAAGTATCAGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGa > 1:927640/1‑68 (MQ=255) acTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGa > 1:28015/2‑68 (MQ=255) cTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGat < 1:266523/68‑1 (MQ=255) cTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGat > 2:911448/1‑68 (MQ=255) cTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGat < 1:662612/68‑1 (MQ=255) cTGGGTAAGTATCCGGAGGCGAAAAGACGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGat < 2:666754/68‑1 (MQ=255) gaaGTATCCGTAGGAGATATGATGACAATGGAATCCGACAGCGTTAACTTACATGCGCTGTATATggg < 1:497726/67‑1 (MQ=255) aaGTCTCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGGTAACGTACAGGCGCTGGATATgggg < 2:997896/68‑1 (MQ=255) aaGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATgggg < 1:877463/68‑1 (MQ=255) tATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGcac > 1:1044009/1‑68 (MQ=255) aTCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGcaca > 2:1044296/1‑68 (MQ=255) ggAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGt < 2:577959/68‑1 (MQ=255) ggAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGt < 2:877016/68‑1 (MQ=255) gAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTc > 1:359658/1‑68 (MQ=255) aGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCg < 1:73460/68‑1 (MQ=255) cggaggatatcgatgctgtttattaactgagagcgggtacaggcgctgGATATGGGGCACATTGTCGt > 1:326294‑M2/49‑68 (MQ=255) cggaggatatcgatgctgtttattaactgagagcgggtacaggcgctgGATATGGGGCACATTGTCGt > 1:357329‑M2/49‑68 (MQ=255) cggaggatatcgatgctgtttattaactgagagcgggtacaggcgctgGATATGGGGCACATTGTCGt > 2:79505‑M2/49‑68 (MQ=255) cggaggatatcgatgctgtttattaactgagagcgggtacaggcgctgGATATGGGGCACATTGTCGt > 1:973876‑M2/49‑68 (MQ=255) aaaTGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGAc < 1:70008/68‑1 (MQ=255) aaTGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACa < 1:738620/68‑1 (MQ=255) aaTGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGCTGACa < 2:746197/68‑1 (MQ=255) tgatgaCACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACAtt > 2:335618/1‑68 (MQ=255) tcgatgctgtttattaactgagagcgggtacaggcgctgGATATGGGGCACATTGTCGTTGACATTGa > 2:801852‑M2/40‑68 (MQ=255) tcgatgctgattattaactgagagcgggtacaggcgctgGCTATGGGGCCCATTGTCGTTGACAGTGa > 1:913252‑M2/40‑68 (MQ=255) atgaCACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGa < 1:519567/68‑1 (MQ=255) gatgctgtttattaactgagagcgggtacaggcgctgGATATGGGGCACATTGTCGTTGACATTGATg > 2:106343‑M2/38‑68 (MQ=255) gatgctgtttattaactgagagcgggtacaggcgctgGATATGGGGCACATTGTCGTTGACATTGATg > 2:161936‑M2/38‑68 (MQ=255) cacTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGgt < 2:645682/68‑1 (MQ=255) cacTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGgt < 1:580077/68‑1 (MQ=255) acTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGgtg > 2:626735/1‑68 (MQ=255) acTCGAAGACGACAGAGTTAACGAACAGGAGCAGGATATGGATCACATAGACGTTGACATTGAAGgtg > 1:526617/1‑68 (MQ=255) ggAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTa < 1:382073/68‑1 (MQ=255) ccGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATc < 1:626736/68‑1 (MQ=255) ccGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATc < 2:28015/68‑1 (MQ=255) ccGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATAGTCGTTGACATTGATGGTGTTAATATc > 2:353751/1‑68 (MQ=255) aGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCactga < 1:342183/68‑1 (MQ=255) aGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCactga < 1:207977/68‑1 (MQ=255) aGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCactga < 2:438898/68‑1 (MQ=255) gTTAACGTACTGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATTGTGTTTATATCactgaact < 2:771912/68‑1 (MQ=38) ttAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCactgaactg < 1:681256/68‑1 (MQ=255) tAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCactgaactga < 1:330552/68‑1 (MQ=255) tAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCactgaactga < 1:509062/68‑1 (MQ=255) tAACGTACAGGCGCTGGATATGGGGCACATAGTCGTTGACATTGATGGTGTTAATATCactgaactga < 1:1044301/68‑1 (MQ=255) tAACGGACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTCAATATCactgaactga < 2:448712/68‑1 (MQ=255) aaCGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCACTGAACTGAt < 2:735406/68‑1 (MQ=255) ggtacaggcgctgGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCACTGAACTGATta < 2:326294‑M2/55‑1 (MQ=255) ggtacaggcgctgGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCACTGAACTGATta < 1:161936‑M2/55‑1 (MQ=255) cGTACAGGCGCTGGATATGGGGCACATTGTCGTTGAc > 2:423857/1‑37 (MQ=255) cGTACAGGCGCTGGATATGGGGCACATTGTCGTTGAc < 1:423857/37‑1 (MQ=255) tacaggcgctgGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCACTGAACTGATtaat > 2:264415‑M2/12‑68 (MQ=255) aggcgctgGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCACTGAACTGATTAATAAg > 2:628189‑M2/9‑68 (MQ=255) ctgGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCACTGAACTGATTAATAAGGCCGc < 2:357329‑M2/65‑1 (MQ=255) | CCCTGGGTAAGTATCCGGAGGCGAAATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCACTGAACTGATTAATAAGGCCGC > NC_000913/2077915‑2078046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |