New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3355606	12 (0.650)	5 (0.310)	4/116	1.3	24.7%	coding (882/4461 nt)	gltB	glutamate synthase, large subunit
	?	NC_000913	= 3355642	20 (1.230)					coding (918/4461 nt)	gltB	glutamate synthase, large subunit

CGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3355536‑3355606 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgggTGGTACTAATAGACGCATGGCGCGGATGATATCCATCCCGCCT  <  NC_000913/3355642‑3355600                                                                                                                    CGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGC                                                >  1:175542/1‑68    TCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGG                                             >  1:42897/1‑68    TCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGG                                             <  1:682/68‑1    TCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGG                                             >  2:167174/1‑68                    CTCTGACTCCAGTTCGATGGCTAACATGCTGGAACTGCTGCTGCCAGGCGGGTGGTACTAATAGACGC                             >  2:44111/1‑68                             CAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGTGGTACTAATAGACGCATGGCGCGG                    >  1:462890/1‑68                                   GATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGTGGTACTAATAGACGCATGGCGCGGATGATA              <  1:25165/68‑1                                   GATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGTGGTACTAATAGACGCATGGCGCGGATGATA              <  2:412264/68‑1                                               GCTGGAACTGCTGCTGGCAGGCGGGTGGTACTAATAGACGCATGGCGCGGATGATGTCCATCCCGCCT  >  1:441086/1‑68                                                                                                                    CGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3355536‑3355606 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgggTGGTACTAATAGACGCATGGCGCGGATGATATCCATCCCGCCT  <  NC_000913/3355642‑3355600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.