| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3355606 | 12 (0.650) | 5 (0.310) | 4/116 | 1.3 | 24.7% | coding (882/4461 nt) | gltB | glutamate synthase, large subunit |
| ? | NC_000913 | = 3355642 | 20 (1.230) | coding (918/4461 nt) | gltB | glutamate synthase, large subunit | |||||
TCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGAC > NC_000913/3355539‑3355672 | tCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGG > 2:167174‑M1/1‑68 (MQ=255)tCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGG < 1:682‑M1/68‑1 (MQ=255)tCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGG > 1:42897‑M1/1‑68 (MQ=255) aaCGAATCCGGCTCTGACTCCAGTTCGATGGATAACATGCTGTAACTGCTGCTGGCAGGCGggatgga < 2:393385/68‑1 (MQ=255) ctctGACTCCAGTTCGATGGCTAACATGCTGGAACTGCTGCTGCCAGGCGGGtggtactaatagacgc > 2:44111‑M1/1‑52 (MQ=255) cAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGtggtactaatagacgcatggcgcgg > 1:462890‑M1/1‑43 (MQ=255) gTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTa < 1:166247/68‑1 (MQ=255) gATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGtggtactaatagacgcatggcgcggatgata < 1:25165‑M1/68‑32 (MQ=255) gATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGtggtactaatagacgcatggcgcggatgata < 2:412264‑M1/68‑32 (MQ=255) gCTGGAACTGCTGCTGGCAGGCGGGtggtactaatagacgcatggcgcggatgatgtccatcccgcct > 1:441086‑M1/1‑25 (MQ=255) ggAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGc > 1:250776/1‑68 (MQ=255) aCTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGa > 2:121193/1‑68 (MQ=255) tgctgGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGaacaac > 1:318346/1‑68 (MQ=255) gctgGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAAcc < 1:122065/68‑1 (MQ=255) gCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGa < 1:497357/68‑1 (MQ=255) gCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGa < 2:42897/68‑1 (MQ=255) gCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACAACCCGCCTGGCAGAACAACCCGGa > 1:290179/1‑68 (MQ=255) gCAGGCGGGATGGATATCATCCGCGCCATGCGGCTATTAGTACCACCCGCCTGGCAGAACAACCCGGa < 1:452649/68‑1 (MQ=255) cAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTGCCACCCGCCTGGCAGAACAACCCGGat > 2:500411/1‑68 (MQ=255) aGGCGGGATGGACATCATCCGCGCCATGCGTCTATTAGTACCAcccgcctgccagcagcagttccagc > 1:441086‑M2/1‑43 (MQ=255) ggatggatATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGAc < 2:1493/68‑1 (MQ=255) | TCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGAC > NC_000913/3355539‑3355672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |