| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3968672 | 10 (0.450) | 3 (0.160) | 3/112 | 1.8 | 21.9% | coding (757/1104 nt) | wecA | UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase |
| ? | NC_000913 | = 3968690 | 13 (0.680) | coding (775/1104 nt) | wecA | UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase | |||||
ATCTGGATCCTGCTCGAAACGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3968597‑3968672‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataatcgccaCCATATCCATTAGCGGAATGGCGATTATCCACAAAGCGGTAACCGGGCTGATGGGATGGGTTTTGC < NC_000913/3968690‑3968625 ATCTGGATCCTGCTCGAAACGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGAT < 1:246486/68‑1 CTGGATCCTGCTCGAAACGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGAT > 1:496289/1‑66 CTGGATCCTGCTCGAAACGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGAT < 2:496290/66‑1 ataCTGCTCGAAACGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGC > 2:126049/4‑68 CCTGCTCGAAACGACCCAGGGCAAACCCCATCCCATCAGCCCGGATACCGCTTTGTGGATAATCGACA > 1:491040/1‑68 ACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCACCATATCCATTA > 1:835052/1‑55 ACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCACCATATCCATTA < 2:835053/55‑1 CGCTTTGTGGATAATCGCCACCATATCCATTAGCGGAATGGCGATTATCCACAAAGCGGTAACCGGGC > 2:38338/1‑68 TAATCGCCACCATATCCATTAGCGGAATGGCGATTATCCACAAAGCGGTAACCGGGCTGATGGGATGG > 2:595036/1‑68 ATCGCCACCTTATCCATTAGCGGAATGGCGATTATCCACAAAGCGGTATCCGGGCTGATGGGATGGGT < 2:144861/68‑1 ATCGCCACCATATCCATTAGCGGAATGGCGATTATCCACAAGGCGGTAACCGGGCTGATGGGATGGGT > 2:113089/1‑68 ATCGCCACCATATCCATTAGCGGAATGGCGATTATCCACAAAGCGGTAACCGGGCTGATGGGATGGGT > 1:126048/1‑68 ATCGCCACCATATCCATTAGCGGAATGGCGATTATCCACAAAGCGGTAACCGGGCTGATGGGATGGGT < 1:422160/68‑1 ATCGCCACCATATCCATTAGCGGAATGGCGATTATCCACAAAGCGGTAACCGGGCTGATGGGATGGGT < 2:284832/68‑1 ATCGCCACCATATCCATTAGCGGAATGGCGATTATCCACAAAGCGGTAACCGGGCTGATGGGATGGGT < 2:576042/68‑1 CACCATATCCATTAGCGGAATGGCGATTATCCACAAAGCGGTAACCGGGCTGATGGGATGGGTTTTGC < 2:487286/68‑1 ATCTGGATCCTGCTCGAAACGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3968597‑3968672‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataatcgccaCCATATCCATTAGCGGAATGGCGATTATCCACAAAGCGGTAACCGGGCTGATGGGATGGGTTTTGC < NC_000913/3968690‑3968625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |