| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3968672 | 10 (0.450) | 3 (0.160) | 3/112 | 1.8 | 21.9% | coding (757/1104 nt) | wecA | UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase |
| ? | NC_000913 | = 3968690 | 13 (0.680) | coding (775/1104 nt) | wecA | UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase | |||||
GCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTCCTGACCGTCAGCATATTCA > NC_000913/3968625‑3968757 | gCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtg < 2:487286‑M2/68‑3 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgat > 1:126048‑M2/1‑61 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgat < 2:284832‑M2/68‑8 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgat < 2:576042‑M2/68‑8 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgat < 1:422160‑M2/68‑8 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCCTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgat > 2:113089‑M2/1‑61 (MQ=255) aCCCATCCCATCAGCCCGGATACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATAAGGtggcgat < 2:144861‑M2/68‑8 (MQ=255) ccatcccatcAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgatta > 2:595036‑M2/1‑59 (MQ=255) gCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgattatccacaaagcg > 2:38338‑M2/1‑48 (MQ=255) cccGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGcc > 2:250820/1‑68 (MQ=255) gCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAgg > 1:656241/1‑68 (MQ=255) gCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAgg > 1:177863/1‑68 (MQ=255) cTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGc > 2:465846/1‑68 (MQ=255) tgGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAg < 1:538926/68‑1 (MQ=255) ccATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATtctct > 1:216874/1‑68 (MQ=255) cATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATtctctc < 2:280454/68‑1 (MQ=255) tAATGGATATGGtggcgattatccacaaagcggtaaccgggctgatgggatgggt < 2:835053‑M2/55‑44 (MQ=255) tAATGGATATGGtggcgattatccacaaagcggtaaccgggctgatgggatgggt > 1:835052‑M2/1‑12 (MQ=255) tGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTCCTGACCGTCAg < 2:422161/68‑1 (MQ=255) atatGGTGGCGATTATGTACCGTCGCCTGCGTAAACGCATGAGCCCATTCTCTCCTGACCGTCAGCat > 2:614734/1‑68 (MQ=255) ggtggCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTCCTGACCGTCAGCATATTc > 2:389697/1‑68 (MQ=255) ggtggCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTCCTGACCGTCAGCATATTc > 1:144101/1‑68 (MQ=255) gtggCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTCCTGACCGTCAGCATATTcc > 1:614400/1‑67 (MQ=255) gtggCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTCCTGACCGTCAGCATATTCa > 2:324665/1‑68 (MQ=255) | GCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTCCTGACCGTCAGCATATTCA > NC_000913/3968625‑3968757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |