| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3968672 | 10 (0.450) | 3 (0.160) | 3/112 | 1.8 | 21.9% | coding (757/1104 nt) | wecA | UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase |
| ? | NC_000913 | = 3968690 | 13 (0.680) | coding (775/1104 nt) | wecA | UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase | |||||
CCTGCTCGAAACGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTC > NC_000913/3968605‑3968738 | ccTGCTCGAAACGACCCAGGGCAAACCCCATCCCATCAGCCCGGATACCGCTTTGTGGATAATCGACA > 1:491040‑M1/1‑68 (MQ=255) tCGAATCGACCCAGGGCATAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCg < 2:491041/68‑1 (MQ=255) cGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATg < 2:403035/68‑1 (MQ=255) ccAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGata > 2:246039/1‑68 (MQ=255) gCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtg < 2:487286‑M2/68‑3 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCAccatatccatta < 2:835053‑M1/55‑13 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCAccatatccatta > 1:835052‑M1/1‑43 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgat > 1:126048‑M2/1‑61 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgat < 2:576042‑M2/68‑8 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgat < 2:284832‑M2/68‑8 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgat < 1:422160‑M2/68‑8 (MQ=255) aCCCATCCCATCAGCCCGGTTACCGCCTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgat > 2:113089‑M2/1‑61 (MQ=255) aCCCATCCCATCAGCCCGGATACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATAAGGtggcgat < 2:144861‑M2/68‑8 (MQ=255) ccatcccatcAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgatta > 2:595036‑M2/1‑59 (MQ=255) gCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGtggcgattatccacaaagcg > 2:38338‑M2/1‑48 (MQ=255) cccGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGcc > 2:250820/1‑68 (MQ=255) cGCTTTGTGGATAATCGCCAccatatccattagcggaatggcgattatccacaaagcggtaaccgggc > 2:38338‑M1/1‑20 (MQ=255) gCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAgg > 1:656241/1‑68 (MQ=255) gCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAgg > 1:177863/1‑68 (MQ=255) cTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGc > 2:465846/1‑68 (MQ=255) tgGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAg < 1:538926/68‑1 (MQ=255) tAATCGCCAccatatccattagcggaatggcgattatccacaaagcggtaaccgggctgatgggatgg > 2:595036‑M1/1‑9 (MQ=255) aTCGCCAccttatccattagcggaatggcgattatccacaaagcggtatccgggctgatgggatgggt < 2:144861‑M1/68‑62 (MQ=255) aTCGCCAccatatccattagcggaatggcgattatccacaaggcggtaaccgggctgatgggatgggt > 2:113089‑M1/1‑7 (MQ=255) aTCGCCAccatatccattagcggaatggcgattatccacaaagcggtaaccgggctgatgggatgggt < 2:284832‑M1/68‑62 (MQ=255) aTCGCCAccatatccattagcggaatggcgattatccacaaagcggtaaccgggctgatgggatgggt < 1:422160‑M1/68‑62 (MQ=255) aTCGCCAccatatccattagcggaatggcgattatccacaaagcggtaaccgggctgatgggatgggt < 2:576042‑M1/68‑62 (MQ=255) aTCGCCAccatatccattagcggaatggcgattatccacaaagcggtaaccgggctgatgggatgggt > 1:126048‑M1/1‑7 (MQ=255) ccATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATtctct > 1:216874/1‑68 (MQ=255) caccatatccattagcggaatggcgattatccacaaagcggtaaccgggctgatgggatgggttttgc < 2:487286‑M1/68‑67 (MQ=255) cATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATtctctc < 2:280454/68‑1 (MQ=255) | CCTGCTCGAAACGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTC > NC_000913/3968605‑3968738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |