| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2277401 = | 34 (0.880) | 7 (0.210) | 5/110 | 2.5 | 20.4% | coding (1102/1590 nt) | yejF | microcin C ABC transporter ATPase |
| ? | NC_000913 | 2277552 = | 26 (0.790) | coding (1253/1590 nt) | yejF | microcin C ABC transporter ATPase | |||||
AACCCGTAAGCCTTCCTCAATAATCTGCAAAACGTTGAGTCGTGGGTTGAGCGAGGAGTTTGGATCCTGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2277472‑2277401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCATT > NC_000913/2277552‑2277618 cACCCGTAAGCCTTCCTCAATAATCTGCAAAACGTTGAGTCGTGGGTTGAGCGAGGATTTTGGATCCT < 1:1427082/67‑1AACCCGTAAGCCTTCCTCAATAATCTGCAAAACGTTGAGTCGTGGGTTGAGCGAGGAGTTTGGATCCT < 1:1101265/68‑1AACCCGTAAGCCTTCCTCAATAATCTGCAAAACGTTGAGTCGTGGGTTGAGCGAGGAGTTTGGATCCT < 1:1208155/68‑1 ACCCGTAAGCCTTCCTCAATAATCTGCAAAACGTTGAGTCGTGGGTTGAGCGAGGAGTTTGGATCCTG > 2:668021/1‑68 GTTGAGTCGTGGGTTGAGCGAGGAGTTTGGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCT > 1:409358/1‑68 GTCGTGGGTTGAGCGAGGAGTTTGGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG > 1:113486/1‑68 GTCGTGGGTTGAGCGAGGAGTTTGGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG > 1:712495/1‑68 TCGTGGGTTGAGCGAGGAGTTTGGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGT > 1:508823/1‑68 TCGTGGGTTGAGCGAGGAGTTTGGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGT > 2:731391/1‑68 GAGTTTGGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTG < 2:409356/68‑1 AGTTTGGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGC < 2:1194538/68‑1 ATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCC > 1:520498/1‑68 ATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCC > 1:401438/1‑68 ATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCC > 2:75725/1‑68 TCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCA > 1:591149/1‑68 TGAAACACGCCACCGTTATCCGTCGGAGTTCTCTGGTGGTCAGCGACAACTTATTGCGATTGCCAGGG < 1:1364583/68‑1 AAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCA < 2:1208151/68‑1 AAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGGCAGCGACAACGTATTGCGATTGCCAGGGCA < 2:356369/68‑1 ACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCATT > 2:1209587/1‑68 ACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCATT > 2:31942/1‑68 AACCCGTAAGCCTTCCTCAATAATCTGCAAAACGTTGAGTCGTGGGTTGAGCGAGGAGTTTGGATCCTGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2277472‑2277401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCATT > NC_000913/2277552‑2277618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |