| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2277401 = | 34 (0.880) | 7 (0.210) | 5/110 | 2.5 | 20.4% | coding (1102/1590 nt) | yejF | microcin C ABC transporter ATPase |
| ? | NC_000913 | 2277552 = | 26 (0.790) | coding (1253/1590 nt) | yejF | microcin C ABC transporter ATPase | |||||
TGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCATT > NC_000913/2277490‑2277618 | tGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGcc < 1:1332686/68‑1 (MQ=255) gCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCa > 1:1165849/1‑68 (MQ=255) ccGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCAc < 1:1221241/68‑1 (MQ=255) ccGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCAc < 2:421878/68‑1 (MQ=255) acaACGCGCACAACAAGTGATAGACGTGAAGAAAGAACTCGGAATAGATCCTGAAGCAAGACACAGtt > 2:379436/1‑68 (MQ=255) acaaGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGt < 1:75320/68‑1 (MQ=255) aGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTtct > 2:205413/1‑68 (MQ=255) gTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTtctc > 2:1175552/1‑68 (MQ=255) tGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTctct > 2:125720/1‑68 (MQ=255) tGAAAGCCGAGATGAATGAAGTGGGATTAGATACTGAAACACGCCACCTTAATCCGGCGGAGATctct > 1:814909/1‑68 (MQ=255) gttgagtcgtgggttgagcgaggagtttggatcctgaaaCACGCCACCGTTATCCGGCGGAGTTctct > 1:409358‑M2/40‑68 (MQ=255) aTAGCCGTGATGCATGAAGTTGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCtgg > 1:505273/1‑68 (MQ=255) aTAGCCGTGATGCATGAAGTGGGATTAGATCCTGAACCACGCCACCGTTATCCGGCGGAGTTCTCtgg > 2:100925/1‑68 (MQ=255) aTAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCGCCGTTATCCGGCGGAGTTCTCtgg > 2:280559/1‑68 (MQ=255) gtcgtgggttgagcgaggagtttggatcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCtggtgg > 1:712495‑M2/35‑68 (MQ=255) gtcgtgggttgagcgaggagtttggatcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCtggtgg > 1:113486‑M2/35‑68 (MQ=255) gCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCtggtgg > 2:297223/1‑68 (MQ=255) gCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCtggtgg > 1:720088/1‑68 (MQ=255) tcgtgggttgagcgaggagtttggatcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCTggtggt > 1:508823‑M2/34‑68 (MQ=255) tcgtgggttgagcgaggagtttggatcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCTggtggt > 2:731391‑M2/34‑68 (MQ=255) cGTGATGCATGAAGTGGGATTAGATCCTGAAACAAGCCACCGTTATCCGGCGGAGTTATCTGGTGGTc > 1:1249199/1‑68 (MQ=255) cGTGATGCATGAAGTGGGATAAGATCCTCAAAAACGCCACCGTAATCCGGCGGAGAAATCTGGTGGTc > 2:134186/1‑68 (MQ=255) atgatgTCGGTTTTGATCCTGAATCACTCCACCTGTTTCCGGCGGAGTTCTCTGGTGGTCAGCGAGaa < 2:876006/68‑1 (MQ=255) aaGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGt < 1:397446/68‑1 (MQ=255) aaGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGt < 2:1101261/68‑1 (MQ=255) aaGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGt < 1:251517/68‑1 (MQ=255) gTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTAt > 1:296571/1‑68 (MQ=255) gagtttggatcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTg < 2:409356‑M2/51‑1 (MQ=255) ggATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGc < 1:124680/68‑1 (MQ=255) agtttggatcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGc < 2:1194538‑M2/52‑1 (MQ=255) ttAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACACAGTCTTGCGAt > 2:1409095/1‑68 (MQ=255) tAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGAtt > 2:1071152/1‑68 (MQ=255) aGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTg > 1:69349/1‑68 (MQ=255) atcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGcc > 2:75725‑M2/10‑68 (MQ=255) atcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGcc > 1:520498‑M2/10‑68 (MQ=255) atcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGcc > 1:401438‑M2/10‑68 (MQ=255) tcctgaaaCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCa > 1:591149‑M2/9‑68 (MQ=255) tgaaaCACGCCACCGTTATCCGTCGGAGTTCTCTGGTGGTCAGCGACAACTTATTGCGATTGCCAggg < 1:1364583‑M2/63‑1 (MQ=255) aaaCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCa < 2:1208151‑M2/65‑1 (MQ=255) aaaCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGGCAGCGACAACGTATTGCGATTGCCAGGGCa < 2:356369‑M2/65‑1 (MQ=255) aCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCAtt > 2:31942‑M2/2‑68 (MQ=255) aCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCAtt > 2:1209587‑M2/2‑68 (MQ=255) | TGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCATT > NC_000913/2277490‑2277618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |