New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3071424	14 (0.700)	5 (0.290)	3/116	1.7	23.6%	intergenic (‑180/+35)	fbaA/pgk	fructose‑bisphosphate aldolase, class II/phosphoglycerate kinase
	?	NC_000913	= 3071467	20 (1.140)					coding (1156/1164 nt)	pgk	phosphoglycerate kinase

ATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3071351‑3071424 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcgctAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAAT  <  NC_000913/3071467‑3071402                                                                                                                                              ATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAG                                                                          >  2:155132/1‑68       TCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCT                                                                    >  1:353063/1‑68       TCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCT                                                                    >  2:370847/1‑68                        GCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCTAAGAAGTAAAAAATCAC                                                   >  1:328065/1‑68                        GCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCTAAGAAGTAAAAAATCAC                                                   >  2:194649/1‑68                                           GTATGAAAAATTGCGTGCTCTAAAAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCC                                <  1:194649/68‑1                                           GTATGAAAAATTGCGTGCTCTAAAAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCC                                <  2:328065/68‑1                                             ATGAAAAATTGCGTGCTCTAAAAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTT                              <  2:89940/68‑1                                                                       CGCTAAGAAGTAAAAAATCACAGTGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCA    <  2:548657/68‑1                                                                         CTAAGAAGTAAAAAATCTCAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAAT  <  1:40647/68‑1                                                                         CTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAAT  >  2:104639/1‑68                                                                         CTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAAT  <  2:263652/68‑1                                                                                                                                              ATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3071351‑3071424 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcgctAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAAT  <  NC_000913/3071467‑3071402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.