| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3071424 | 14 (0.700) | 5 (0.290) | 3/116 | 1.7 | 23.6% | intergenic (‑180/+35) | fbaA/pgk | fructose‑bisphosphate aldolase, class II/phosphoglycerate kinase |
| ? | NC_000913 | = 3071467 | 20 (1.140) | coding (1156/1164 nt) | pgk | phosphoglycerate kinase | |||||
ATTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTACTTTACCTTCCACGAATTCGAGG > NC_000913/3071402‑3071525 | aTTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTag < 2:263652‑M2/68‑3 (MQ=255)aTTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTag > 2:104639‑M2/1‑66 (MQ=255)aTTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGTTTCCCTGCCCTGAGATTTTTTACTTCTTag < 1:40647‑M2/68‑3 (MQ=255) tGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGTTTCCCTGCACTGTGATTTTTTACTTCTTagcg < 2:548657‑M2/68‑5 (MQ=255) aGCGCGCTGAAACAAGGGCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCa > 1:191270/1‑68 (MQ=255) aGCGCGCTGAAACAAGGGCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCa > 2:113766/1‑68 (MQ=255) aGCGCGCTGAAACAAGGGAAGGTTTCCCTGCACTGAGATTTATTACTTCTTAGCGCGCACTTCGAGCa > 2:567614/1‑68 (MQ=255) cgcgcTGAAACAAGGGCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATc < 1:578438/68‑1 (MQ=255) aaGGGCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTagcgcgcttttagagcacgcaatttttcat < 2:89940‑M2/68‑31 (MQ=255) aaGGGCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTgcagg > 2:286116/1‑68 (MQ=255) gggCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTagcgcgcttttagagcacgcaatttttcatac < 1:194649‑M2/68‑33 (MQ=255) gggCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTagcgcgcttttagagcacgcaatttttcatac < 2:328065‑M2/68‑33 (MQ=255) gggCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTgcaggcg > 2:579193/1‑67 (MQ=255) gCAGGTTTCCCTGCCCTGTTATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGcagtcagt < 2:556657/68‑1 (MQ=255) gCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGt < 1:703396/68‑1 (MQ=255) gCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGt < 2:576044/68‑1 (MQ=255) gCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGt < 2:371215/68‑1 (MQ=255) cAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTa < 1:407319/68‑1 (MQ=255) cAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTa < 1:113766/68‑1 (MQ=255) aGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTAc < 2:281911/68‑1 (MQ=255) aGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTAc < 2:347541/68‑1 (MQ=255) ctgccctgTGATTTTTTACTTCTTAGCGCGCTCTTCGAGAATCGCTACTGCAGGCAGTACTTTACCtt > 1:733317/1‑68 (MQ=255) gccctgTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTACTTTACCTTcc < 2:753223/68‑1 (MQ=255) gtgATTTTTTACTTCTTagcgcgcttttagagcacgcaatttttcatactctaaataattcgagttgc > 2:194649‑M2/1‑17 (MQ=255) gtgATTTTTTACTTCTTagcgcgcttttagagcacgcaatttttcatactctaaataattcgagttgc > 1:328065‑M2/1‑17 (MQ=255) gtgATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTACTTTACCTTCCACGaa < 1:155132/68‑1 (MQ=255) gATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTACTTTACCTTCCACGAAtt < 2:33712/68‑1 (MQ=255) tttttACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTACTTTACCTTCCACGAATTCGa > 1:327526/1‑68 (MQ=255) tttACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTACTTTACCTTCCACGAATTCGAgg > 1:139163/1‑68 (MQ=255) | ATTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGTTTCCCTGCCCTGTGATTTTTTACTTCTTAGCGCGCTCTTCGAGCATCGCTACTGCAGGCAGTACTTTACCTTCCACGAATTCGAGG > NC_000913/3071402‑3071525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |