| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1792600 | 16 (0.800) | 6 (0.340) | 3/118 | 1.8 | 27.7% | coding (132/465 nt) | nlpC | putative C40 clan peptidase lipoprotein |
| ? | NC_000913 | = 1792651 | 17 (0.950) | coding (81/465 nt) | nlpC | putative C40 clan peptidase lipoprotein | |||||
CCACAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGC > NC_000913/1792533‑1792666 | ccACAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCGCCATAACGATACGGCGTGCCCTGCCAG > 1:106444‑M1/1‑68 (MQ=255) tCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTa > 1:421950/1‑68 (MQ=255) tCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCATTGTa > 1:605590/1‑68 (MQ=255) aCAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCtt < 2:510410/58‑1 (MQ=255) aCAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCtt > 1:510409/1‑58 (MQ=255) aCAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCt > 1:351192/1‑57 (MQ=255) aCAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCt < 2:351193/57‑1 (MQ=255) acCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAAc > 2:617307/1‑68 (MQ=255) ccgcgccgcgTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAGcc > 1:4243/1‑68 (MQ=255) ccgcgccgcgTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAAcc > 2:220540/1‑68 (MQ=255) gcgccgcgTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCgg < 1:599380/68‑1 (MQ=255) gcgTCATGCCACCATAACGATACGGCGTGCCATGCCAGactttctgattcgattaccgttattgccgg > 2:755231‑M1/1‑38 (MQ=255) gcgTCATGCCACCATAACGATACGGCGTGCCATGCCAGactttctgattcgattaccgttattgccgg > 1:616663‑M1/1‑38 (MQ=255) tCATGCCACCATAACGATACGGCGTGCCATGCCAGctttctgattcgattaccgttattgccggtttg < 1:421228‑M1/68‑34 (MQ=255) cATGCCACCATAACGATACGGCGTGCCATGCCAGactttctgattcgattaccgttattgccggtttg < 1:755230‑M1/68‑35 (MQ=255) gCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTaa < 2:26017/68‑1 (MQ=255) aaCGATACGGCGTGCCATGCCAGactttctgattcgattaccgttattgccggtttgaacgaccagct < 2:616664‑M1/68‑46 (MQ=255) aaCGATACGGCGTGCCATGCCAGactttctgattcgattaccgttattgccggtttgaacgaccagct < 2:246680‑M1/68‑46 (MQ=255) aCGGCTTGCCATGCCAGATTTGTAGCTGTTCGTTCAAACCGGCAATAACGTTTATCGAATCAGaaatt < 1:630844/68‑3 (MQ=255) aCGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAGCCGGCAATAACGGTAATCGAATCAGAAAGt > 1:724658/1‑68 (MQ=255) aCGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGt > 1:233697/1‑68 (MQ=255) ggCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTct < 1:325287‑M2/68‑3 (MQ=255) gCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATTACGGTAATCGAATCAGAAAGTctg < 2:267022‑M2/68‑4 (MQ=255) ccaGCTTTGTAGCTGGTCGTTCAAACCGGCTATAAAGGTAATCGAATCAGAAAGTCTGGCATTTggcg > 2:402286/1‑68 (MQ=255) caGactttctgattcgattaccgtaattgccggtttgaacgaccagctacaaagctggcatggcacgc < 2:267022‑M1/68‑66 (MQ=255) aGactttctgattcgattaccgttattgccggtttgaacgaccagctacaaagctggcatggcacgcc < 1:325287‑M1/68‑67 (MQ=255) aGCTTTGTAGCTGGTCGTTCAAACCGGCAAAAACGGTGATCGAATCAGAAAGTCAGGCATTTggcggc > 1:66135/1‑68 (MQ=255) | CCACAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGC > NC_000913/1792533‑1792666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |