| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1792600 | 16 (0.800) | 6 (0.340) | 3/118 | 1.8 | 27.7% | coding (132/465 nt) | nlpC | putative C40 clan peptidase lipoprotein |
| ? | NC_000913 | = 1792651 | 17 (0.950) | coding (81/465 nt) | nlpC | putative C40 clan peptidase lipoprotein | |||||
ACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAA > NC_000913/1792584‑1792714 | aCGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAGCCGGCAATAACGGTAATCGAATCAGAAAGt > 1:724658/1‑68 (MQ=255)aCGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGt > 1:233697/1‑68 (MQ=255) ggCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTct < 1:325287‑M2/68‑3 (MQ=255) gCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATTACGGTAATCGAATCAGAAAGTctg < 2:267022‑M2/68‑4 (MQ=255) ccaGCTTTGTAGCTGGTCGTTCAAACCGGCTATAAAGGTAATCGAATCAGAAAGTCTGGCATTTggcg > 2:402286/1‑68 (MQ=255) aGCTTTGTAGCTGGTCGTTCAAACCGGCAAAAACGGTGATCGAATCAGAAAGTCAGGCATTTggcggc > 1:66135/1‑68 (MQ=255) tGTAGCTGGGCGTGCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGc < 2:106444/68‑1 (MQ=255) aGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTctggcatggcacgccgtatcgtt < 2:616664‑M2/68‑24 (MQ=255) aGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTctggcatggcacgccgtatcgtt < 2:246680‑M2/68‑24 (MQ=255) gCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATCTGGCGGCGGCGCTTTa < 1:174830/68‑1 (MQ=255) cGTTCAAACCGGCATTAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTAaggtgg < 1:40507/68‑1 (MQ=255) cGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTAtggtgg < 1:94942/68‑1 (MQ=255) cAAACCGGCAATAACGGTAATCGAATCAGAAAGtggcatggcacgccgtatcgttatggtggcatga < 1:421228‑M2/68‑35 (MQ=255) cAAACCGGCAATAACGGTAATCGAATCAGAAAGTctggcatggcacgccgtatcgttatggtggcatg < 1:755230‑M2/68‑35 (MQ=255) ccGGCAATAACGGTAATCGAATCAGAAAGTctggcatggcacgccgtatcgttatggtggcatgacgc > 2:755231‑M2/1‑30 (MQ=255) ccGGCAATAACGGTAATCGAATCAGAAAGTctggcatggcacgccgtatcgttatggtggcatgacgc > 1:616663‑M2/1‑30 (MQ=255) ccGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGt < 1:623837/48‑1 (MQ=255) ccGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGt > 2:623838/1‑48 (MQ=255) ggCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCgg < 2:421951/68‑1 (MQ=255) ggCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCgg < 2:507268/68‑1 (MQ=255) gCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGc < 2:37047/68‑1 (MQ=255) aaTAACGGTAATCGAAACAGAATGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCa > 2:425665/1‑68 (MQ=255) aaCGGTAATCGAACCAGAAAGTCTGGCACTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGaa < 1:483860/68‑1 (MQ=255) ggTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCa > 1:689368/1‑68 (MQ=255) aTCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGc < 1:200340/68‑1 (MQ=255) cGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACCCCCGGCCAGAAGCAGTGCtg > 1:523741/1‑68 (MQ=255) aaaGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCaaa > 2:197855/1‑68 (MQ=255) | ACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAA > NC_000913/1792584‑1792714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |