| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,311,380 | IS4 (+) +12 bp | noncoding (156‑167/174 nt) | psrO → | novel sRNA, function unknown |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3311380 = | 0 (0.000) | 27 (1.350) | 17/132 | 0.1 | 100% | noncoding (156/174 nt) | psrO | novel sRNA, function unknown |
| ? | NC_000913 | 4502090 = | NA (NA) | noncoding (1426/1426 nt) | IS4 | repeat region | |||||
| * | ? | NC_000913 | = 3311391 | 0 (0.000) | 17 (0.850) | 13/132 | 0.3 | 100% | noncoding (167/174 nt) | psrO | novel sRNA, function unknown |
| ? | NC_000913 | = 4503515 | NA (NA) | noncoding (1/1426 nt) | IS4 | repeat region | |||||
GTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTATTTCCAGGGCCTCTCC > NC_000913/4502024‑4502157 | gctcatcgagcgcctgggtctgcgtcgctaattcttgcgagtttcagaaaagggggcctgagtggcTa > 2:588155‑M2/67‑68 (MQ=255) tcatcgagcgcctgggtctgcgtcgctaattcttgcgagtttcagaaaagggggcctgagtggcTAAt > 2:28401‑M2/65‑68 (MQ=255) tcatcgagcgcctgggtctgcgtcgctaattcttgcgagtttcagaaaagggggcctgagtggcTAAt < 2:647486‑M2/4‑1 (MQ=255) aaactcGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATATGCATCTTGGTTCTGTAAt > 2:143289/4‑68 (MQ=255) aTTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAAt < 1:445362/68‑1 (MQ=255) ctcGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGcc > 1:564610/1‑68 (MQ=255) gagcgcctgggtctgcgtcgctaattcttgcgagtttcagaaaagggggcctgagtggcTAAtgccga > 2:587985‑M2/60‑66 (MQ=255) gagcgcctgggtctgcgtcgctaattcttgcgagtttcagaaaagggggcctgagtggcTAATGCcag > 1:416196‑M2/60‑68 (MQ=255) cGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCAGATTGGTTCTGTAATGCcag > 1:381717/1‑68 (MQ=255) ctgggtctgcgtcgctaattcttgcgagtttcagaaaagggggcctgagtggcTAATGCCAGTCAGtt < 1:690766‑M2/15‑1 (MQ=255) ctgggtctgcgtcgctaattcttgcgagtttcagaaaagggggcctgagtggcTAATGCCAGTCAGtt < 1:517279‑M2/15‑1 (MQ=255) ctgggtctgcgtcgctaattcttgcgagtttcagaaaagggggcctgagtggcTAATGCCAGTCAGtt < 1:398421‑M2/15‑1 (MQ=255) ctgggtctgcgtcgctaattcttgcgagtctcagaaaagggggcctgagtggcTAATGCCAGTCAGtt < 1:458801‑M2/15‑1 (MQ=255) cAACCAGATAATTTATCAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGtt < 1:641300/68‑1 (MQ=255) cAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGtt < 1:39712/68‑1 (MQ=255) cAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGtt < 2:547805/68‑1 (MQ=255) cAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGtt < 1:561020/68‑1 (MQ=255) cAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCAGCTTGGTTCTGTAATGCCAGTCAGtt < 1:525188/68‑1 (MQ=255) aaCCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTa > 2:448030/1‑68 (MQ=255) aaTTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAactg > 1:716739/1‑68 (MQ=255) gtcgctaattcttgcgagtttcagaaaagggggcctgagtggcTAATGCCAGTCAGtt > 1:751073‑M2/44‑58 (MQ=255) gtcgctaattcttgcgagtttcagaaaagggggcctgagtggcTAATGCCAGTCAGtt < 2:751074‑M2/15‑1 (MQ=255) aTTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAactga < 2:114790/68‑1 (MQ=255) aTTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAactga > 2:630942/1‑68 (MQ=255) ttAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGtt < 1:149793/56‑1 (MQ=255) ttAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGtt > 2:149793/1‑56 (MQ=255) taccAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTAAAGCAacagactg > 1:67167/4‑68 (MQ=255) tAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAactgaatg > 2:330764/1‑68 (MQ=255) aCAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGc > 1:656691/1‑68 (MQ=255) aCAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGc > 1:561698/1‑68 (MQ=255) aCAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGc > 2:519473/1‑68 (MQ=255) aGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAAt > 1:76180/1‑40 (MQ=255) aGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAAt < 2:76180/40‑1 (MQ=255) cttgcgagtttcagaaaagggggcctgagtggcTAATGCCAGTCAGTTAAGCAACTGACTGGCTCttt > 1:465513‑M2/34‑68 (MQ=255) ttgcgagtttcagaaaagggggcctgagtggcTAATGCCAGTCAGTTAAGCAACTGACTGGCTCtttt < 1:154352‑M2/36‑1 (MQ=255) cTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCgg > 1:95475/1‑68 (MQ=255) gtttcagaaaagggggcctgagtggcTACTGCCAGACAGATAAGCAACTGCCTGGCTCTATTTAgggg > 1:169194‑M2/27‑68 (MQ=255) gtttcagaaaagggggcctgagtggcTAATGCCAGTCAGTTAGGCAACTGACTGGCTCTTTTTAgggg > 1:170040‑M2/27‑68 (MQ=255) tttcagaaaagggggcctgagtggcTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGc < 2:626033‑M2/43‑1 (MQ=255) tttcagaaaagggggcctgagtggcTAATGCCAGTCAGTTAAGCAACTGACTGGCGCTTTTTCGGGGc < 2:578468‑M2/43‑1 (MQ=255) ttcagaaaagggggcctgagtggcTAATGCCTGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCt < 2:117424‑M2/44‑1 (MQ=255) aaagggggcctgagtggcTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTgggg < 2:321482‑M2/50‑1 (MQ=255) aaagggggcctgagtggcTAATACCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTgggg < 2:623322‑M2/50‑1 (MQ=255) aTAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTgggg < 1:35162/68‑1 (MQ=255) aGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTa < 1:476022/68‑1 (MQ=255) gggggcctgagtggcTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTAt > 2:272199‑M2/16‑68 (MQ=255) ggggcctgagtggcTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTAtt < 2:446520‑M2/54‑1 (MQ=255) cATCTTGGTGCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTAttt < 2:135682/68‑1 (MQ=255) aTCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTATTTc < 2:745658/68‑1 (MQ=255) ttGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTATTTCCAg > 2:81852/1‑68 (MQ=255) gagtggcTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTATTTCCAggg < 2:84368‑M2/61‑1 (MQ=255) gagtggcTAATGCCAGTCAGGTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTATTTCCAggg < 2:626749‑M2/61‑1 (MQ=255) ttCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGTGTATTTCCAGGGcc < 1:513165/68‑1 (MQ=255) tCTGTAATGCCAGTCAGTAAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTATTTCCAGGGcat > 2:408976/1‑66 (MQ=255) tGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTATTTCCAGGGCctct < 1:448218/68‑1 (MQ=255) gcTTATGCCAGGCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGTGTATTTCCAGGGCctct < 1:354130‑M2/66‑1 (MQ=255) gcTAATGCCTGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGTGCTGTGGGGTATTTCCAGGGCctct < 2:409762‑M2/66‑1 (MQ=255) cgTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGCATTTCCAGGGCctct < 1:597733/67‑1 (MQ=255) cTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGGGGGGTATTTCCAGGGCCtctc < 2:218312‑M2/67‑1 (MQ=255) tAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTATTTCCAGGGCCTCTcc < 1:289543/68‑1 (MQ=255) | GTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAACGAAATAGGCATCTTGGTTCTGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTATTTCCAGGGCCTCTCC > NC_000913/4502024‑4502157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |