| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1881698 = | 11 (0.430) | 3 (0.130) | 3/122 | 2.3 | 20.6% | coding (112/924 nt) | dmlR | transcriptional activator of dmlA |
| ? | NC_000913 | 1881770 = | 13 (0.540) | coding (40/924 nt) | dmlR | transcriptional activator of dmlA | |||||
GCTGGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGAAGAACTGGGCGTTTCACCGGCGTTCGTCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1881768‑1881698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaTAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAG > NC_000913/1881770‑1881833 GCTGGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGGAGGGCTGGGCGTGTCACCGGCGTTCGTCg > 2:657533/1‑67GCTGGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGAAGGGCTGGGCGTTTCGCCGGCGTTCGTCA > 2:598918/1‑68GCTGGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGAAGGACTGGGCGTTTCACCGGCGTTCGTCA > 2:323813/1‑68GCTGGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGAAGAGCTGGGCGTTTCACCGGCGTTCGTCA > 2:590424/1‑68GCTGGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGAAGAACTGGGCGTTTCACCGGCGTTCGTCA > 1:812870/1‑68GCTGGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGAAGAACTGGGCGTTTCACCGGCGTTCGTCA > 2:395612/1‑68GCTGGTGGCTCGCCGGGCTGGATTTGCCGCCGTGGCGGAAGAACTGGGCGTATCACCGGCGTTCGTCA > 1:534180/1‑68GCTGGTGGCTCGACGGGCTGGTTTTGCCGCAGTGGCGGAAGAACTGGGCGTTTCACCGGCGTTCGTCA > 1:4897/1‑68 GGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGAAGAACTGGGCGTTTCACCGGCGTTCGTCAGCA > 2:883059/1‑68 TTTTGCCGCCGTGGCGGAAGAACTGGGCGTTTCACCGGCGTTCGTCAGCATAAAGACGCGCAAATC > 1:722805/1‑66 TTTTGCCGCCGTGGCGGAAGAACTGGGCGTTTCACCGGCGTTCGTCAGCATAAAGACGCGCAAATC < 2:722803/66‑1 CGTTTCACCGGCGTTCGTCAGCATAAAGCCGCGCAAATCATTCGGCAGCGGTAAATTATTCATGATTC > 2:518783/1‑68 CAGCAAAAAGTCGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCA < 1:355842/68‑1 AGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAG < 2:309621/68‑1 AGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAG < 2:380941/68‑1 GCTGGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGAAGAACTGGGCGTTTCACCGGCGTTCGTCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1881768‑1881698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaTAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAG > NC_000913/1881770‑1881833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |