| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1881698 = | 11 (0.430) | 3 (0.130) | 3/122 | 2.3 | 20.6% | coding (112/924 nt) | dmlR | transcriptional activator of dmlA |
| ? | NC_000913 | 1881770 = | 13 (0.540) | coding (40/924 nt) | dmlR | transcriptional activator of dmlA | |||||
GCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAG > NC_000913/1881709‑1881833 | gCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGAc > 1:80642/1‑68 (MQ=255) gAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCaa < 1:173542/68‑1 (MQ=255) gAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCaa < 1:23246/68‑1 (MQ=255) aCGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATc < 2:362196/68‑1 (MQ=255) ttttgccgccgtggcggaagaactgggcgtttcaccggcgttcgtcagcaTAAAGACGCGCAAATc < 2:722803‑M2/16‑1 (MQ=255) ttttgccgccgtggcggaagaactgggcgtttcaccggcgttcgtcagcaTAAAGACGCGCAAATc > 1:722805‑M2/51‑66 (MQ=255) gCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCAt < 2:453563/68‑1 (MQ=255) cttcCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCagcagc < 1:693264/68‑1 (MQ=255) cttcCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCagcagc < 1:256381/68‑1 (MQ=255) cttcCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCagcagc < 2:402668/68‑1 (MQ=255) ccGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGt < 1:703860/68‑1 (MQ=255) gCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTaa < 1:666957/68‑1 (MQ=255) cgtttcaccggcgttcgtcagcaTAAAGCCGCGCAAATCATTCGGCAGCGGTAAATTATTCATGATTc > 2:518783‑M2/24‑68 (MQ=255) gCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCgtgt < 1:611652/68‑1 (MQ=255) cccGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGtt > 1:501873/1‑68 (MQ=255) caccaGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCa > 1:145082/1‑68 (MQ=255) cagcaAAAAGTCGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCa < 1:355842‑M2/63‑1 (MQ=255) agcaTAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAg < 2:309621‑M2/64‑1 (MQ=255) agcaTAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAg < 2:380941‑M2/64‑1 (MQ=255) | GCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAG > NC_000913/1881709‑1881833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |