| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1881698 = | 11 (0.430) | 3 (0.130) | 3/122 | 2.3 | 20.6% | coding (112/924 nt) | dmlR | transcriptional activator of dmlA |
| ? | NC_000913 | 1881770 = | 13 (0.540) | coding (40/924 nt) | dmlR | transcriptional activator of dmlA | |||||
ACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACC > NC_000913/1881634‑1881765 | ctggtgaaacataaaacacgaatcatgaataatttaccgctgctgaatgatttgcgcgtctttaTGCt < 2:380941‑M1/4‑1 (MQ=255)ctggtgaaacataaaacacgaatcatgaataatttaccgctgctgaatgatttgcgcgtctttaTGCt < 2:309621‑M1/4‑1 (MQ=255) tggtgaaacataaaacacgaatcatgaataatttaccgctgctgaatgatttgcgcgacttttTGCTg < 1:355842‑M1/5‑1 (MQ=255) ggtggtGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACg < 1:335264/68‑1 (MQ=255) gCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTg > 2:703858/1‑68 (MQ=255) gaatcatgaataatttaccgctgccgaatgatttgcgcggctttaTGCTGACGAACGCCGGTGAAACg > 2:518783‑M1/46‑68 (MQ=255) aacaCCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGCCGAACGCCGGTGCCACGCCCAg > 2:145499/1‑68 (MQ=255) aacaCCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAg > 1:801041/1‑68 (MQ=255) caccacGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGtt > 2:903087/1‑68 (MQ=255) caccacGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGtt > 2:812867/1‑68 (MQ=255) caccacGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGtt > 1:309621/1‑68 (MQ=255) caccacGTTTAGCGTTAGCTCCAGCAAGGAGATGCGCTTGCTGACGAACGCCGGTGAAGAGCCCAGta > 1:620457/1‑67 (MQ=255) cGTTTGCTCCAGCAAGGCGGTGCGCTTGCTGACGACCGCCGGTGAAACGCCCAGTTCTTCCGCCAcgg > 2:693264/1‑68 (MQ=255) cGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGACCGCCGGTGAAACGCCCAGTTCTTCCGCCAcgg > 1:11012/1‑68 (MQ=255) cGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCAcgg > 2:256381/1‑68 (MQ=255) gatttgcgcgtctttaTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCaaaa > 1:722805‑M1/17‑66 (MQ=255) gatttgcgcgtctttaTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCaaaa < 2:722803‑M1/50‑1 (MQ=255) TGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGccacc > 2:883059‑M1/1‑68 (MQ=255) | ACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACC > NC_000913/1881634‑1881765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |