New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2236569	13 (0.500)	3 (0.150)	3/102	1.9	21.4%	noncoding (36/150 nt)	REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences
	?	NC_000913	= 2236597	12 (0.600)					noncoding (64/150 nt)	REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences

TGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2236496‑2236569 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttatccggcctacaaTAAGCTCAACATACTGATTTGTATGGTTTTGTAGGCCGGATAAGGCGTTCAAGCC  <  NC_000913/2236597‑2236543                                                                                                                                   TGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGC                                                               >  1:198137/1‑68    AAAACCAGAGACGCATCCGGCATTTGGTACCTTTCGCCGGATGCGGCTTGAACTCCTTATCCGGCCTA                                                            <  1:300077/68‑1       ACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA                                                         >  1:193476/1‑68       ACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA                                                         >  1:430941/1‑68                              GTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAATAAGCTCAACATACTGATTTGTA                                  >  2:54648/1‑68                                TCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAATAAGCTCAACATACTGATTTGTATG                                <  1:54648/68‑1                                                       ACGCCATATCCGGCCTACAATAAGCTCAACATACTGATATGTATGGTTTTGTAGGCCGGATAAGGCGT         >  1:576921/1‑68                                                              ATCCGGCCTACAATAAGCTCAACATACTGATTTGTATGGTTTTGTAGGCCGGATAAGGCGTTCAAGCC  >  2:210206/1‑68                                                                                                                                   TGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2236496‑2236569 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttatccggcctacaaTAAGCTCAACATACTGATTTGTATGGTTTTGTAGGCCGGATAAGGCGTTCAAGCC  <  NC_000913/2236597‑2236543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.