New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1015208 =	22 (0.850)	7 (0.330)	3/110	2.1	24.4%	coding (313/564 nt)	pqiC	DUF330 family putative lipoprotein
	?	NC_000913	1015844 =	25 (1.160)					coding (130/168 nt)	rmf	ribosome modulation factor

TGCCATCATAGCGACCGTTAAACTCCGTTACGGTAACATTGAGCGTGTCCTGGGCGCTTCCCAGAGGCTGGGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1015283‑1015208 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgggaggcTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCC  >  NC_000913/1015844‑1015908                                                                                                                                               TGCCATCATAGCGACCGTTAAACTCCGTTACGGTAACATTGAGCGTGTCCTGGGCGCTTCCCAGAGGC                                                                           <  1:249049/68‑1                CGTTAAACTCCGTTACGGTAACATTGAGCGTGTCCTGGGCGCTTCCCAGAGGCTGGGAGG                                                                    >  1:297463/1‑60                CGTTAAACTCCGTTACGGTAACATTGAGCGTGTCCTGGGCGCTTCCCAGAGGCTGGGAGG                                                                    <  2:297463/60‑1                                GGTAACATTGAGCGTGTCCTGGGCGCTTCCCAGAGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAG                                            >  2:306247/1‑68                                GGTAACATTGAGCGTGTCCTGGGCGCTTCCCAGAGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAG                                            >  2:397280/1‑68                                GGTAACATTGAGCGTGTCCTGGGCGCTTCCCAGAGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAG                                            >  2:801863/1‑68                                GGTAACATTGAGCGTGTCCTGGGCGCTTCCCAGAGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAG                                            >  2:803090/1‑68                                   AACATTGAGCGTGTCCTGGGCGCTTCCCAGAGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGT                                         <  1:306247/68‑1                                                                GAGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAA            <  1:801866/68‑1                                                                GAGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAA            <  1:803093/68‑1                                                                          GGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCC  >  2:482094/1‑68                                                                                                                                               TGCCATCATAGCGACCGTTAAACTCCGTTACGGTAACATTGAGCGTGTCCTGGGCGCTTCCCAGAGGCTGGGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1015283‑1015208 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgggaggcTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCC  >  NC_000913/1015844‑1015908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.