| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1015208 = | 22 (0.850) | 7 (0.330) | 3/110 | 2.1 | 24.4% | coding (313/564 nt) | pqiC | DUF330 family putative lipoprotein |
| ? | NC_000913 | 1015844 = | 25 (1.160) | coding (130/168 nt) | rmf | ribosome modulation factor | |||||
CGCCGGACGCTCAAAAGAAATGTGTCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCC > NC_000913/1015777‑1015908 | cGCCGGACGCCCAAAAGAAATGTGCCCCCATCCGTCGCTGATTCAAAGGTCACACTGGCTGGGAGGCt < 2:832019/68‑1 (MQ=255) tCATAAGAAATGTGTCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTTGGAGGCTGGCGAGAAGc < 1:456366/68‑1 (MQ=255) aaTGTGTCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCgg > 2:359136/1‑68 (MQ=255) tgtgTCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGAc > 2:83022/1‑68 (MQ=255) ggtaacattgagcgtgtcctgggcgcttcccagaggctgggaggcTGGCGAGAAGCCATGGCGGACAg > 2:803090‑M2/46‑68 (MQ=255) ggtaacattgagcgtgtcctgggcgcttcccagaggctgggaggcTGGCGAGAAGCCATGGCGGACAg > 2:306247‑M2/46‑68 (MQ=255) ggtaacattgagcgtgtcctgggcgcttcccagaggctgggaggcTGGCGAGAAGCCATGGCGGACAg > 2:801863‑M2/46‑68 (MQ=255) ggtaacattgagcgtgtcctgggcgcttcccagaggctgggaggcTGGCGAGAAGCCATGGCGGACAg > 2:397280‑M2/46‑68 (MQ=255) gtCCCTATCTGACGCTGAATCACAGGTCTCAATGGCTGTGAGGCTGGCGAGAAGCCATGGCTGACAgg < 2:483947/68‑1 (MQ=255) gtCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAgg < 1:536744/68‑1 (MQ=255) gtCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAgg < 1:625625/68‑1 (MQ=255) gtCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAgg < 1:638193/68‑1 (MQ=255) gtCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAgg < 2:664823/68‑1 (MQ=255) gtCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAgg < 2:564342/68‑1 (MQ=255) tCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAggg < 1:698868/68‑1 (MQ=255) aacattgagcgtgtcctgggcgcttcccagaggctgggaggcTGGCGAGAAGCCATGGCGGACAGGgt < 1:306247‑M2/26‑1 (MQ=255) tATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGgtagt < 2:139196/68‑1 (MQ=255) tATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGgtagt < 2:241648/68‑1 (MQ=255) tCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTaa > 1:595019/1‑68 (MQ=255) agccGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGGAGCAATGGCGGACAGGGTAGTAATg > 2:382714/4‑68 (MQ=255) aCGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGTCGGACAGGGTAGTAATGGc < 1:436567/68‑1 (MQ=255) aCGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGAGAGAAGCCATGGCGGACAGGGTAGTAATGGc > 1:431844/1‑68 (MQ=255) gCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCt > 2:344374/1‑68 (MQ=255) aaaGTTCACAATGGCTGGGAGTCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGt < 1:98035/68‑1 (MQ=255) aaaGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGt > 1:833114/1‑68 (MQ=255) aGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAgg > 1:812912/1‑45 (MQ=255) aGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAgg < 2:812909/45‑1 (MQ=255) tCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCtt < 2:595019/68‑1 (MQ=255) tCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCtt < 1:725559/68‑1 (MQ=255) gcacaATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGTGTAGTAATGGCCTGATTCTGTCTCtt < 1:724364/67‑1 (MQ=255) gaggctgggaggcTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTaaaa < 1:803093‑M2/55‑1 (MQ=255) gaggctgggaggcTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTaaaa < 1:801866‑M2/55‑1 (MQ=255) ggcTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTcc > 2:482094‑M2/4‑68 (MQ=255) | CGCCGGACGCTCAAAAGAAATGTGTCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGATTCTGTCTCTTTAAAAAGAAACCTCC > NC_000913/1015777‑1015908 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |