| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1015208 = | 22 (0.850) | 7 (0.330) | 3/110 | 2.1 | 24.4% | coding (313/564 nt) | pqiC | DUF330 family putative lipoprotein |
| ? | NC_000913 | 1015844 = | 25 (1.160) | coding (130/168 nt) | rmf | ribosome modulation factor | |||||
TGGATCAACAGTTGCGCAACACCCTGGTTGCCAACCTGAGTACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACGGTCGCT > NC_000913/1015143‑1015274 | ggaggtttctttttaaagagacagaatcaggccattactaccctgtccgccatggcttctcgccagcc > 2:482094‑M1/66‑68 (MQ=255) aaCAGTTGCGCAACACCCTGGTTGCCAACCTGAGTACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAg > 1:777293/1‑68 (MQ=255) ttttaaagagacagaatcaggccattactaccctgtccgccatggcttctcgccagcctcccagcctc < 1:801866‑M1/13‑1 (MQ=255) ttttaaagagacagaatcaggccattactaccctgtccgccatggcttctcgccagcctcccagcctc < 1:803093‑M1/13‑1 (MQ=255) gTTGCGCAACACCCTGGTTGCCAACCTGAGTACGCAACTGCCCGGCTGGGCGGTTGCCTCCCAGCctc < 2:211798/68‑1 (MQ=255) ccTGAGTACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCa < 1:427664/68‑1 (MQ=255) ccTGAGTACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCa < 2:777290/68‑1 (MQ=255) tGAGTACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAAt < 1:184362/68‑1 (MQ=255) tGAGTACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAAt < 2:136353/68‑1 (MQ=255) tGAGTACCCAACTGCCCGTCTGTGTGTTCGCCTCCCAGCCTCTGTGAAGCGCCCTGGACACGCTCAAt < 2:894899/68‑1 (MQ=255) ggAGTACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAAt < 1:184363/67‑1 (MQ=255) cgAGTTCGCAACTGCCCGGCTGGGTGTTCGCCTCCCAGCCGCTGGGAAGCGCCCAGGACACGCTCAAt < 2:894898/67‑1 (MQ=255) cgAGTACGCAACTGCCCGGCTGGGTGGCTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAAt < 2:733283/67‑1 (MQ=255) accctgtccgccatggcttctcgccaGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGtt < 1:306247‑M1/42‑1 (MQ=255) aCGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGttgc > 2:68860/1‑66 (MQ=255) aCGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTAc > 2:112913/1‑68 (MQ=255) ctgtccgccatggcttctcgccaGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTAcc > 2:803090‑M1/24‑68 (MQ=255) ctgtccgccatggcttctcgccaGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTAcc > 2:801863‑M1/24‑68 (MQ=255) ctgtccgccatggcttctcgccaGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTAcc > 2:306247‑M1/24‑68 (MQ=255) ctgtccgccatggcttctcgccaGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTAcc > 2:397280‑M1/24‑68 (MQ=255) aCTGCCCGGCTGGGTGGTTGCCTCACAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGATACCGTaa > 1:940912/1‑68 (MQ=255) ccGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACgg > 2:275833/1‑66 (MQ=255) ccGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACgg < 1:275833/66‑1 (MQ=255) cGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGt < 2:966360/68‑1 (MQ=255) gtggtTGCCGCCCAGCCGCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACgg < 1:452571/68‑1 (MQ=255) ggtTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACGGTc > 2:157382/1‑68 (MQ=255) ggtTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACGGTc > 1:525874/1‑68 (MQ=255) gtTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACGGTCg < 1:718577/68‑1 (MQ=255) tGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACGGTCGCt < 2:168089/68‑1 (MQ=255) tGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACGGTCGCt < 2:103668/68‑1 (MQ=255) | TGGATCAACAGTTGCGCAACACCCTGGTTGCCAACCTGAGTACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACGGTCGCT > NC_000913/1015143‑1015274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |