New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1387098	20 (0.770)	7 (0.300)	3/120	2.3	33.2%	coding (379/1542 nt)	tyrR	aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase
	?	NC_000913	= 1387248	10 (0.430)					coding (529/1542 nt)	tyrR	aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase

TATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1387028‑1387098 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcacCGGTCAGGACGTGTTGATCATTTTCATCCT  <  NC_000913/1387248‑1387219                                                                                                       TATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCG                                   >  2:900797/1‑68  ATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGC                                  <  2:163743/68‑1  ATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGC                                  <  2:268295/68‑1  ATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGC                                  <  2:775100/68‑1   TGGCGAACCCGGCGAGCTGTCATCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCA                                 <  1:576516/68‑1   TGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCA                                 >  1:956730/1‑68    GGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCTAAAATTTGATCGCCTGCGCAACCATACCGCCGCAC                                <  1:770622/68‑1     GCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCgcg                               >  1:423487/1‑65                                GGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACCGGTCAGGACGTGTTGATCATTTTCATC    >  1:668464/1‑68                                GGGCAAAAATTGGATCGCCTGCGCAACAATACCTCCGCCCCGGTCAGGACGTGATGATCATATTCATC    >  1:668463/1‑68                                  GCAAAAATTGTATCGCCTGCGCAACCTTACCTCCGCACCGGTCAGGACGTGTTGATCATTTTCATCCT  <  1:31962/68‑1                                  GCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACCGGTCAGGACGTGTTGATCATTTTCATCCT  <  1:605927/68‑1                                  GCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACCGGTCAGGACGTGCTGATCATTTTCATCCT  <  2:238687/68‑1                                              TCGCCTGCGCAACCATACCGCCGCACCGGTCAGGACGTGTTGATCATTTTCATCCT  <  1:402834/56‑1                                              TCGCCTGCGCAACCATACCGCCGCACCGGTCAGGACGTGTTGATCATTTTCATCCT  >  2:402834/1‑56                                                                                                       TATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1387028‑1387098 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcacCGGTCAGGACGTGTTGATCATTTTCATCCT  <  NC_000913/1387248‑1387219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.