New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1967784	45 (1.300)	4 (0.120)	4/234	3.8	8.3%	coding (718/1050 nt)	cheB	fused chemotaxis regulator: protein‑glutamate methylesterase in two‑component regulatory system with CheA
	?	NC_000913	= 1967815	46 (1.410)					coding (687/1050 nt)	cheB	fused chemotaxis regulator: protein‑glutamate methylesterase in two‑component regulatory system with CheA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGACGGTTAACCGCCGGGCCATCGTGAATTTTGATTTGGTAATTTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1967632‑1967784 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcgccGGGCGATCGGCATATGGAGCTGTCGCGTAGTGGCGCAAATTACC  <  NC_000913/1967815‑1967772                                                                                                                                                                                                       TCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGACGGTTAACCGCCGGGCCATCGTGAATTTTGATTTGGTAATTTG                                                  >  7:62934/1‑149                           CGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGACGGTTAACCGCCGGGCCATCGTGAATTTTGATTTGGTAATTTGCGCCGGGCGATCGGCATATGGAGCTG                        >  7:54567/1‑149                                        CCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGACGGTTAACCGCCGGGCCATCGTGAATTTTGATTTGGTAATTTGCGCCGGGCGATCGGCATATGGAGCTGTCGCGTAGTGGCG           >  4:30744/1‑149                                                CATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGACGGTTAACCGCCGGGCCATCGTGAATTTTGATTTGGTAATTTGCGCCGGGCGATCGGCATATGGAGCTGTCGCGTAGTGGCGCAAATTAC   <  3:30744/149‑1                                                 ATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGACGGTTAACCGCCGGGCCATCGTGAATTTTGATTTGGTAATTTGCGCCGGGCGATCGGCATATGGAGCTGTCGCGTAGTGGCGCAAATTACC  <  8:54567/149‑1                                                                                                                                                                                                       TCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGACGGTTAACCGCCGGGCCATCGTGAATTTTGATTTGGTAATTTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1967632‑1967784 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcgccGGGCGATCGGCATATGGAGCTGTCGCGTAGTGGCGCAAATTACC  <  NC_000913/1967815‑1967772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.