| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 458,790 | IS186 (–) +6 bp :: Δ1 bp | intergenic (+90/‑93) | clpX → / → lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 458790 = | 0 (0.000) | 33 (0.880) | 30/278 | 0.2 | 100% | intergenic (+90/‑98) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | 608008 = | NA (NA) | noncoding (2/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 458795 | 1 (0.030) | 31 (0.830) | 28/276 | 0.3 | 96.7% | intergenic (+95/‑93) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | = 609351 | NA (NA) | noncoding (1345/1345 nt) | IS186 | repeat region | |||||
CTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCG > NC_000913/458656‑458937 | cTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAACAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTCTTCCCGCCGTTGAATGTGCGGGAAACAtaa > 1:637916‑M1/1‑140 (MQ=255) gtggtgaattatcgagttcttcgtgcttaccaatatgggccagtattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacatcccttaagttagcgcttatgggGAAACATccc > 2:424530‑M1/134‑143 (MQ=255) tgccgcagtatccatgtctgcgggcttaccaatttgggccagaattgctgaccagttatcgggagagtaattcatcggcacgttaaatcatatcaggcttaataccacaacccttaagttagcgcttatgggGAAACATcccc > 2:85796‑M1/133‑143 (MQ=255) tcctggcAAGGCGGATGCGCAACAGGCATCTGGTGCATAATTAACCATTCCCATACAATTAGTTATCCAAAAAGGGTGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataa < 2:200981‑M1/140‑9 (MQ=255) aGCCGGAAGCGCAACAGGTATCTTGTAAATAATCAACCATGCCCATACAATTAGTTAACCAAAAAGGGGCGATTTTATCTCCCCTTTAATCTGTCCTCCATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaac < 2:715400‑M1/143‑17 (MQ=255) ccGGAAGCGCAACAGGCAGCTGGTGAAGAATTAGCCATTTCCATACGATTAGTTAACCAAAAAGGGGGGATTTTATCTCACCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaactt < 2:525354‑M1/143‑19 (MQ=255) cgcgtcgggctgaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACa > 1:320189‑M1/118‑143 (MQ=255) gAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaag > 1:459912‑M1/1‑122 (MQ=255) gAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCCTTGAATGTGGGCGAAACAtcccataagcgctaactcaag > 2:258859‑M1/1‑122 (MQ=255) aaagAGCAACAGGCATCTGGTGAATAAATAACCATACCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaag < 1:434623‑M1/142‑22 (MQ=255) aaGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTACTCTATTCTCGGAGTTGAATGTGGGGGAAACAtaccataagcgctaactaaagg > 1:399838‑M1/1‑121 (MQ=255) ttcgggcttaccaatatgggccagaattgatgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagatagcgattatgggGAAACATACCCATATACTGACGCAcatct < 2:114009‑M1/29‑3 (MQ=255) ggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAAt < 2:57764‑M1/33‑1 (MQ=255) ttaggCATTTGGTAAATGATGGACGATTCCCATATTTTTTGTTAACCAAAAAGGGGGGATTTTATCACCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagtgctaacttaagggttgaac < 2:97017‑M1/141‑30 (MQ=255) ccaatataggccagaattgctgaccagttaccgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATgg > 1:701480‑M1/105‑143 (MQ=255) taatatgggtaagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGc > 1:134425‑M1/104‑143 (MQ=255) ggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGc > 1:434291‑M1/97‑143 (MQ=255) gccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGca < 2:692053‑M1/48‑1 (MQ=255) taatTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGTGATTTTATCTCCCCTTTAATTTTTCCTCTATTCGCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaacgcga < 1:358120‑M1/143‑46 (MQ=255) ttgctgaccagttatcgtgagaggaattaatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTACTAGATGCCGTGAAGCACAGTCgt < 2:520317‑M1/55‑1 (MQ=255) ttCCCTTACAAGCTGTTAACCAGAAAGGGGGGATTTTATCTCCCCTTTAATTTTTTCTCTATTTTCGGCGTTGAATGTGGGGGAAACAtccgagaagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtg < 1:466720‑M1/143‑56 (MQ=255) agttattatgagattaattcatcggcacgataaatcataacaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGa > 1:145274‑M1/80‑143 (MQ=255) agttatcgtgagagtaattcatcggcacgttaaatcatttcagttgtaataccacaactagtaagtaagcgcggaggggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGa > 1:25911‑M1/80‑143 (MQ=255) aTACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcg > 2:313055‑M1/1‑83 (MQ=255) atcgtgagagtaattcagcggcattttaaatcctctcagccgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAc > 2:506518‑M1/76‑143 (MQ=255) cAAGTAGTTAGCCAAAAAGTGTGGATTTTATCTCCTCTTTAATTTGTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgtta < 2:245306‑M1/143‑64 (MQ=255) gtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagggcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTg > 2:81680‑M1/73‑143 (MQ=255) agagtaattcgtcggcacgttaaatcatatcagtcgtagtaccgctagccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAGGAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCg > 2:253905‑M1/70‑143 (MQ=255) gagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATACCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAATCGAGTTCTCTGCTTACATGGCgg < 2:68601‑M1/75‑1 (MQ=255) ttAACCAAATATGGGGGATTTTATCCCCCCTTTAATTTCTGCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgat < 2:637916‑M1/143‑71 (MQ=255) ttAACCAAAAATGGTGGATTTTATCTCCCCTTTAATTTTTCCTCTAGTCGCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgat < 1:292180‑M1/143‑71 (MQ=255) taattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCCTATACTGACGTACATGTTAATAGATGTCGTGAAGCACAGTCGTGTCATCTAATTACATGGCGGaaa < 1:170496‑M1/78‑1 (MQ=255) ggggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttc < 2:459912‑M1/143‑82 (MQ=255) gggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgtact > 2:720703‑M1/1‑61 (MQ=255) tgttaaatcatattaggcgtaagagcacagcccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGTGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagaga > 2:195100‑M1/53‑143 (MQ=255) cgataaatcacagcaggcgaaataccacaacccttaagttagcgcttatgggGAAACAGCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGAGTACCTGGCGGAAATTAAACTAagaga > 1:136802‑M1/53‑143 (MQ=255) gttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagagag < 1:534471‑M1/92‑1 (MQ=255) ttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagagaga < 2:610967‑M1/93‑1 (MQ=255) tATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcg < 1:621646‑M1/143‑92 (MQ=255) tATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaacaatctgaagaatacgacgcctcgatgcctagttaaaaagatgcctcgcgttcttcaattgcg > 2:190768‑M1/1‑52 (MQ=255) tcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctct < 2:681649‑M1/98‑1 (MQ=255) tcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCACCATATACGGACGTGCATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGGTTACCTGGCGGAGATTAGACTAAGAGGGAGctct < 1:269722‑M1/98‑1 (MQ=255) atatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGCCGCACATGTTAATAGCTGGCGTGAAGCACAGTCGTGTCATCTGATTACCTTGCGGAAATTAAACTAAGAGAGAGTTCTAt < 1:231200‑M1/100‑1 (MQ=255) ccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgta < 1:313055‑M1/143‑99 (MQ=255) cTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtag < 1:431394‑M1/143‑100 (MQ=255) tgtaaTTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtagg < 2:458678‑M1/141‑101 (MQ=255) gtaatacctacactcttaagttagctcttcttggCAAACATCCCCATATACTGACGTACATGTTAATAGAGGGCGTGACGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGa > 1:669911‑M1/35‑143 (MQ=255) tttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgagccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgagatttgtaggatgtc > 1:636496‑M1/1‑38 (MQ=255) ttttCCTCTAGTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatcttaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtca < 2:61914‑M1/143‑107 (MQ=255) tttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcttcgttaagacgatgactcgaatacttcaatagcgttttgtaggcggtcag > 1:538138‑M1/1‑36 (MQ=255) taccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGCACTTAAACTAAGAGAGACCTCTATGCATCATGAGCGt < 2:468523‑M1/113‑1 (MQ=255) ccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCCCTGTCGTGTCATCTGATAAAATAGCAAAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTc < 1:346328‑M1/115‑1 (MQ=255) ccTCTTTTCTCGGCGTTTAATGTGGGGTATACAttccataagcgctaactgaagggttgaaccaactgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcaggga < 1:6904‑M1/143‑111 (MQ=255) caacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCCATGAATCCTGAGCGTTCTGa < 2:423701‑M1/118‑1 (MQ=255) acccttaagttagtgcttattttGAAACATTCCCATATACTGACGTACATGTTAAAAGAGGGCGGGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAAc > 1:94120‑M1/24‑143 (MQ=255) tctcGGTGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtc < 1:681953‑M1/143‑118 (MQ=255) ctcGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaaggggtgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcc < 1:487037‑M1/143‑119 (MQ=255) taagttagcccttatgggAAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCAtt > 1:184688‑M1/19‑143 (MQ=255) gggtgttgaATGTGGGGGAAACAtgccataagcgctcacttaagggttgaaccagctgaagcatgcggcgcctgggtgactcgttaagacgatgcctcgcgttcttcaattttggtttgtaggctgtcagggatactgtccca < 2:215748‑M1/139‑121 (MQ=255) agttagcgcttatgggGAAACATCCCCATATACTGACGAACATATTAATAGATGGCGTGAAGCACAGACGTGACATATGATTACCTAGAGGAAAATAAACTAAGAGAGAGATCTATGAATCCTGAGCGTACAGAAAgcataaa < 2:505999‑M1/127‑4 (MQ=255) tagcccttatgggGGAACAGCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAGATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAAt > 2:444342‑M1/14‑143 (MQ=255) ttGAATGTGGGGGAAACCtcccataagccctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagtgatactgtcccacgaat < 2:652171‑M1/143‑126 (MQ=255) ttatggggAAAAATCCCCATATACTGACGTACATTTATGTATATAGCGTGAAGCACAAGCGTGTCATCTGATTACCTGGCGGAACTTAAACTAAGAGAGAGCTCTAGGAATCCTGAGCGTTATGAACGCATTGAAATCcgcgg > 2:13342/5‑142 (MQ=255) gggggAAAGAtctgataagcgctaagctaatggttgaaccgtctgaggagtgcgacgcctcggttcgtcgttaagacgatgcctcgcgttcttcaattgcgttttggaggctgtcagggatactgtcccacgaatggccacct < 2:7366‑M1/143‑134 (MQ=255) gggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGACATCCCCGTATTg < 2:423464‑M1/140‑1 (MQ=255) ggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTCAGAGAGAGCTCTATGAATCCTGAGAGTTCAGAACGCATTGAAATCCCCGTATTGc < 1:418863‑M1/141‑1 (MQ=255) ggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCAAAGTCGTGTCATCTGACTACCTGGCGGAAATTAAACTAAGAGAGAGTTCTATGAATCCTGAGCGTGCTGAAGGGATTGAAATCCACGaattcc < 2:61733‑M1/141‑3 (MQ=255) aCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCAGTGAAATCCCCGGATTGCCGCTg > 2:25591/1‑143 (MQ=255) atcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccccctgtaagctcc > 2:681242‑M1/1‑1 (MQ=255) | CTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCG > NC_000913/458656‑458937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |