| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 458,790 | IS186 (–) +6 bp :: Δ1 bp | intergenic (+90/‑93) | clpX → / → lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 458790 = | 0 (0.000) | 33 (0.880) | 30/278 | 0.2 | 100% | intergenic (+90/‑98) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | 608008 = | NA (NA) | noncoding (2/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 458795 | 1 (0.030) | 31 (0.830) | 28/276 | 0.3 | 96.7% | intergenic (+95/‑93) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | = 609351 | NA (NA) | noncoding (1345/1345 nt) | IS186 | repeat region | |||||
TGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACT‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCC > NC_000913/607870‑608148 | tGCTGTGTTTAGCGGTGCTGGGATTTACGCTTCCGGTCGGAGCAC‑AGAATTGTTGGTGTGCGGTGAAGAAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCAt < 1:301208/143‑1 (MQ=255)tGCTGTGTTTAAGGGTGCTGGGATTTCCTCTTACGG‑CGTTATCTGCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCAt < 1:689019/143‑1 (MQ=255) cTGTGTTTAAAGGTGCTGGGATTTACGCTTCTGGGCGGAGACT‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGGAGCCGGTGTGCGGGGGGTCAGCCCAtga > 2:187839/1‑141 (MQ=255) ttAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACT‑CGCTGTGTGAGTTTACGGTGAGGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTAAGAACCGAAGAGGTAGCCGTTGTGCGGGGAGTAGTCGCATAAGCGGTa > 1:668380/1‑143 (MQ=255) aaCGGTGCTGGGATTTACGCTTCTGGTCGGAGACT‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGACGAAGTAGCCGATGTGCGGGGACTAAACCCACACGCGCGAAc > 2:706872/1‑143 (MQ=255) gTGCTGGGATTTACGCTTCTTGTCTTAGACT‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTaa < 1:315970/143‑1 (MQ=255) tGGGATTTACGCTTCTGGTCGGAGACT‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGt > 2:365906/1‑143 (MQ=255) gggATTTACGCTTCTGGTCGGAGACT‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGACGTAGCCGTTGTGCGGGTAGTAATCCCATAAGCGCTAACTTAAGGGtt > 1:66181/1‑143 (MQ=255) gggATTTACGCTTCTGGTCGGAGACT‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATAGTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGCGCAATCCCATGCGCGCTTCCTTCTGGGtt > 1:634138/1‑143 (MQ=255) gCTTCTGGTCGGAGACT‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATCTGCGCTATCTTAAGGGATGTGGTATTa > 1:318948/1‑143 (MQ=255) cTTCTGGTCGGAGACT‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc < 1:173488/143‑1 (MQ=255) t‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa > 2:156870/1‑143 (MQ=255) tgggtgtgtgAGTTTCCTGTGAAGGGACGTAAGAGTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGGGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa < 2:242377/139‑1 (MQ=37) gtgAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGCTGTGGTATTACGCCTGAGATGCTTTAACATGcc > 2:507336/1‑143 (MQ=255) gaCGGTGAAGGAACGTAGTTTTGAGTTTAAGGTCGTTTTCGCTTAGGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAt < 2:343339/142‑1 (MQ=25) aaGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGATATTACGCCTGATATGATTTAACGTGCCGATGAATTACtctc > 1:577173/1‑143 (MQ=255) aaCGTAATATTGAGTTTAAGGTTGTTCTCGTTTACGAACCTAATAATTAGCTGTTGTGCGGTGAGTAATCCCATAAGCGCTAACTTAAGTGTTGTGGTATTACGCCTTATATGATTTAACGTGCCGATGAATTACTCTCACGa < 2:647339/143‑1 (MQ=21) tAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACATGCCGATGAATTACTCTCAAGATAAc > 1:381531/1‑143 (MQ=255) ggAGCTTGAGGCTGTTTTCGCTTACTAACCGAGGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAATGTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa < 2:563378/142‑1 (MQ=18) gAGTTTAAGGCTGTTCCCGCTTACGAACCGAAGAACTAGCCTTGGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg < 2:5559/143‑1 (MQ=255) tttAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTGTTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTAGTcaacaa > 1:410854/1‑143 (MQ=255) aaGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTc < 1:465865/143‑1 (MQ=255) ggCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAAACTCACGATAACTGCTCAGCAATTCTg > 1:585658/1‑143 (MQ=255) gCTGTTCTCGCTTACTAATCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTgg < 1:676302/143‑1 (MQ=255) gCTGTTCTCGCTTACTAACCTATGTAGTTTCCGTTGTTCTGTGAGTAATCCCATAAGCGCGAACTTAAGGGTTGCGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTgg < 1:180954/143‑1 (MQ=14) tGTTCTTTCTTATGATCCGAAGAAGCAGCCGTTGTGTGTGGAGTAATCCTATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGcc < 1:448361/143‑1 (MQ=17) aCGAACCGAAGAAGTAGACGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTGAAGGGATGGGGTATTACGACTGATATGATTTAACGTGCCGATGAATTACTCTCACAAGAACTAGTAAGGAACTCCGACCTATAATGGTaa > 2:296980/1‑143 (MQ=17) cGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACTGCTGATATGATTTAACGTGCCGATGAATTACTCTCACGCTAACTAGCCAGCAATTCCGGCCCATATTGGTAACGCCga > 2:287435/1‑143 (MQ=17) gaagaaGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgca > 2:189589/1‑141 (MQ=255) aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGa < 1:365906/143‑1 (MQ=255) gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTCGAt > 1:709476/1‑143 (MQ=255) gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTAGCCCATATTGGTAAGCCAGAAGAACTGGAt > 1:483319/1‑143 (MQ=255) tAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCCTTTTGGTAAGCCCGAAGGAGTGGCTCCTTCGGCCCGTTATg > 1:110918/1‑143 (MQ=11) aTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGAATACTTCGGCACGTAATGcc > 1:324313/1‑143 (MQ=11) | TGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACT‑CGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCC > NC_000913/607870‑608148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |