Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,526,449 IS5 (+) +4 bp intergenic (‑300/‑17) nudE ← / → yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)53 (1.020) 47/282 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3526449 = 0 (0.000)intergenic (‑300/‑20) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein
* ? NC_000913 = 2290113NA (NA)40 (0.780) 35/280 0.5 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3526452 0 (0.000)intergenic (‑303/‑17) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

TTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTT  >  NC_000913/2288778‑2289053
                                                                                                                                               |                                                                                                                                      
ttttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaagg                                                                                                                                       >  2:955523/1‑143 (MQ=255)
ttttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaagg                                                                                                                                       >  2:712187/1‑143 (MQ=255)
tgttAGATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaagg                                                                                                                                       <  1:116451/141‑1 (MQ=255)
  ttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACCGTTGATGCCAATGCTATGGGGGGATAGcaggaa                                                                                                                                     >  2:213380/1‑143 (MQ=255)
   tataTGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATCAACCAGCTGGAT‑‑ATCTTTTTCCCGGACAACACCATCAACTGTCCCACCATCCCCCACAGTTACAGCCAACGCTATGGGTGAATATacggacg                                                                                                                                    >  2:364227/1‑141 (MQ=255)
       tGCTGGTCTCCGCCAGGATTGATTTTCGTATTGTTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGc                                                                                                                                <  2:663605/143‑1 (MQ=255)
        gCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCg                                                                                                                               >  2:733085/1‑143 (MQ=255)
          tGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCACATAAAATAGGTGGGTTGGTCGTGTTCAGTAACAAGTACTT‑‑ACTTTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGaa                                                                                                                             >  1:221765/1‑143 (MQ=255)
             tctcCGCCAGGATTGATTTTCGTATTATTGGCGTTCCCATACACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCCATGGGTGAATATAAGGCAGGTGCGAATaa                                                                                                                          >  2:837789/1‑143 (MQ=255)
                ccGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCg                                                                                                                       <  2:851467/143‑1 (MQ=255)
                 cGCCATGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGcta                                                                                                                      <  2:390672/143‑3 (MQ=255)
                 agcctctattgattTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCgg                                                                                                                      <  1:690747/136‑1 (MQ=255)
                   ctagcgttgattTCCGGATTCGTGGCGGTAACATAAACCACCTGAAT‑‑ATATTTTTCCAGGACAAAACCATCAACTGTCTCACCATATTCAACCGTTGATGCTAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCgggg                                                                                                                    <  2:197049/137‑1 (MQ=255)
                   ccAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCgggg                                                                                                                    <  1:571762/143‑1 (MQ=255)
                    cAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGCACCCGCCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGa                                                                                                                   <  1:442338/143‑1 (MQ=255)
                     aGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCTTCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGaa                                                                                                                  >  1:857257/1‑143 (MQ=255)
                     aGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGATGAGAATGAGCGGGGac                                                                                                                  >  1:844973/1‑142 (MQ=255)
                         ttgattTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAttc                                                                                                              <  1:955523/143‑1 (MQ=255)
                            attTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAttcttc                                                                                                           >  1:686108/1‑143 (MQ=255)
                             ttttCGTATTATTGGCGGTCCCATAGACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATAGACTGCCGCAGCATACGCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATtcttct                                                                                                          <  2:929698/143‑1 (MQ=39)
                              tttCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCGGGACAACACCATCAACTGTCTAACCATACTCAACAGTTGATGCCAACGCTATCGGTGAATATCAGGAAGGTGCGACTAGGCGGGGAAAttcgtcac                                                                                                         >  2:362797/1‑141 (MQ=255)
                                tCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCgg                                                                                                       <  1:363868/143‑1 (MQ=255)
                                   tattatTGGCGGTCCCATAAAACAGCTGGAT‑‑ATGTTTTTCCAGGACAACACCATCACCTGTCTCACCATACTCAACAGTTGATGCCAAAGCTATGGGTGAATATAAGGAAGGTGGGACTAAGCGGGGAAATCATACTCGGCTg                                                                                                    >  2:363591/1‑143 (MQ=255)
                                     ttattGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAc                                                                                                  >  2:658667/1‑143 (MQ=255)
                                        ttGGTGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa                                                                                               >  1:468850/1‑143 (MQ=255)
                                        ttGGCGGTCCTATAAGACAGCGGGAT‑‑ATCTTTTCCCTGGACAACACCATCAGCTGTCTTACCATGCTCTACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa                                                                                               <  2:617891/143‑1 (MQ=37)
                                                   aTAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcgtttcatt                                                                                    >  1:143199/1‑143 (MQ=255)
                                                            ctgttt‑‑atCTTTTTCCAGGACAACACTATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTTAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                                                           <  1:548890/138‑1 (MQ=255)
                                                              ggAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt                                                                         <  1:855990/143‑1 (MQ=255)
                                                              ggAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt                                                                         <  1:712187/143‑1 (MQ=255)
                                                                    atCTTTTTCCAGGACAACTCCTTCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGc                                                                     <  2:104815/143‑1 (MQ=255)
                                                                     tCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATATCATCTCTTCACGTTTCAGcc                                                                    >  2:586766/1‑143 (MQ=255)
                                                                     tCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATACTTCTCGGCTGACTCAGTCATTTCATTTCTTCCTGTTTGAGcc                                                                    >  2:122382/1‑143 (MQ=255)
                                                                       tttttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGa                                                                  >  2:817289/1‑143 (MQ=255)
                                                                             cAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGCGAAATTCTTCTCGGCTGAGTCAGCCCTCTCATTCCTTCATGTTTGAGCCGAtttttt                                                            >  2:8367/1‑143 (MQ=25)
                                                                              aGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATACGGACGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCGTTTCCTTTCTTCATGTTTGAGCCGATTTTTtc                                                           >  1:367427/1‑143 (MQ=255)
                                                                              aGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc                                                           >  1:340673/1‑143 (MQ=255)
                                                                                      acCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATATCTTCATGTTTGATCCGATTTTTGCTCCCGTaa                                                   >  2:713071/1‑143 (MQ=255)
                                                                                          tctgcTGTCTCACCATACTCAACAGTGGATGCCAGTGCTGTGGGTGACTATAAGGAAGGTGCGAAGAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGc                                               <  2:189168/139‑1 (MQ=18)
                                                                                            aacgggctcACCATCCTCAACAGTTGATGCCAAGGCTAGGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCt                                             <  2:541641/137‑1 (MQ=18)
                                                                                             aCTGTCTCACTATACTGAACAGTTGATGCCTATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCGGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt                                            <  1:716832/143‑1 (MQ=255)
                                                                                                  ctcACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGTAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATc                                       >  1:857328/1‑143 (MQ=255)
                                                                                                     aCCATACTCAACAGTTGCTGCCAGTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                    <  2:452873/143‑1 (MQ=255)
                                                                                                     aCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                    <  1:733681/143‑1 (MQ=255)
                                                                                                     aCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCAGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAgt                                    >  1:85788/1‑142 (MQ=255)
                                                                                                       cATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCt                                  >  2:748491/1‑143 (MQ=255)
                                                                                                          aCTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAtt                               <  1:748491/143‑1 (MQ=255)
                                                                                                            tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                             >  1:153844/1‑143 (MQ=255)
                                                                                                            tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                             >  2:355014/1‑143 (MQ=255)
                                                                                                            tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                             >  1:540772/1‑143 (MQ=255)
                                                                                                            tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAAGAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                             >  1:912742/1‑143 (MQ=255)
                                                                                                            tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGGGCGAGTAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                             >  1:405723/1‑143 (MQ=255)
                                                                                                             gagcAGTGGATGCGAATGCTATGGGGGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCGCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATGTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAg                            <  2:728967/140‑1 (MQ=14)
                                                                                                             cagcAGTTGAGGCCAATGCGATGGGTGAATATAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAg                            <  2:310846/140‑1 (MQ=255)
                                                                                                              aaCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGCTTTTTTCTCCCGTGAATGCCTTGAATCAGCGTATTTAGa                           >  1:98740/1‑143 (MQ=255)
                                                                                                                  gTTCATGGCGATGCTAGGGGTGAATATCACGAAGGTGCGAAGAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGt                       <  1:186253/143‑1 (MQ=14)
                                                                                                                    tGATGCTAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGttt                     <  1:299324/143‑1 (MQ=255)
                                                                                                                     gATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTCGAGCCGATTTTTTCTCCCGTAACTGCCTTGCTTCCCCCTACTTAGTCCTTttc                    >  1:298195/1‑143 (MQ=17)
                                                                                                                        gCCGATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc                 <  2:849927/143‑1 (MQ=255)
                                                                                                                        gCCAATGCTATGGGTGAATATCAGGAAGGTCTGTAGTAGCGTTGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAACTGCCTTGAATCAGCCTATTTAGACCGTtccttc                 >  2:784025/1‑143 (MQ=14)
                                                                                                                           aaTGCTATGGTTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGcc              <  2:844973/143‑1 (MQ=255)
                                                                                                                           aaTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGcc              <  2:857257/143‑1 (MQ=255)
                                                                                                                            aTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGACTATTTAGACCGTATCTTCGACa             >  1:928443/1‑143 (MQ=255)
                                                                                                                               cTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCCTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATACCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAttt          >  1:722334/1‑143 (MQ=255)
                                                                                                                                tATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTGTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCTTTTa         >  1:83469/1‑143 (MQ=255)
                                                                                                                                  tGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg       <  1:733085/143‑1 (MQ=38)
                                                                                                                                   gggTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACAGTTTCTTCGCCGTCTAAgg      >  2:821220/1‑143 (MQ=255)
                                                                                                                                     gTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCCTTTAAGTCg    >  2:647891/1‑143 (MQ=25)
                                                                                                                                       gAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTCGACCGTTTCTTCGCCATTTCAGGCGtt  >  2:947326/1‑143 (MQ=18)
                                                                                                                                       gAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATAAGCCTATTTAGACCGATTCTTCGCCATTTAAGGCttt  >  2:443185/1‑143 (MQ=16)
                                                                                                                                               |                                                                                                                                      
TTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTT  >  NC_000913/2288778‑2289053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.