Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,526,449 IS5 (+) +4 bp intergenic (‑300/‑17) nudE ← / → yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)53 (1.020) 47/282 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3526449 = 0 (0.000)intergenic (‑300/‑20) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein
* ? NC_000913 = 2290113NA (NA)40 (0.780) 35/280 0.5 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3526452 0 (0.000)intergenic (‑303/‑17) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

GATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGC  >  NC_000913/3526308‑3526589
                                                                                                                                             |                                                                                                                                            
gATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACt                                                                                                                                             >  1:638733/1‑143 (MQ=255)
    ttCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCGGGTGCGACTGACCACGCCTCACCAACTAAgg                                                                                                                                         <  2:478221‑M2/143‑3 (MQ=255)
       cGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTCAggaag                                                                                                                                      <  1:208571‑M2/143‑6 (MQ=255)
          ccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATg                                                                                                                                   <  1:119596‑M2/12‑1 (MQ=255)
           cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATgg                                                                                                                                  <  1:736490‑M2/13‑1 (MQ=255)
              aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGa                                                                                                                               >  1:57417‑M2/128‑143 (MQ=255)
                gtggcggagagacgggctaaacaggcggattgaaggcatttacgggagaaaagatcggctcaaacatgaagaactgaaatgactgagtgagccgagaagaatttccccgcttattcgcacctgccCTAAGTAAGATGGGGaaa                                                                                                                             <  2:638554‑M2/18‑1 (MQ=255)
                      taatacgATCATCGGTGGTTGTGATGTGCTTAATGATGCTCACTTTAATCTCCACGCTTGGCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccc                                                                                                                       >  2:227053‑M2/4‑123 (MQ=255)
                       gCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccct                                                                                                                      >  1:794957‑M2/1‑122 (MQ=255)
                           acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCAcc                                                                                                                  >  2:618091‑M2/115‑143 (MQ=255)
                             ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgcgtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGCAAAGCATGCGCACCAt                                                                                                                >  2:773498‑M2/113‑143 (MQ=255)
                              tCAGCGTTTACTGTGATGTGCTTAATGATGCTCAAGTTTAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCTACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                               >  2:37870‑M2/1‑115 (MQ=255)
                               tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaagttccccgcttattcgcaccttccCTAAGTAAAATGGGGAAAGCATGAGAACCATtg                                                                                                              >  2:141340‑M2/111‑143 (MQ=255)
                                ctaaatagcctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATtgt                                                                                                             <  1:528684‑M2/34‑1 (MQ=255)
                                aGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgaga                                                                                                             <  1:273621‑M2/143‑31 (MQ=255)
                                aGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgaga                                                                                                             >  2:674233‑M2/1‑113 (MQ=255)
                                   ggTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCAAGCTTGCAGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACGACGCCTGACAGACGAAggaaggtgcgaacaagtccccgagatgagaaga                                                                                                          <  2:270170‑M2/143‑34 (MQ=255)
                                   aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagccagccgagaagaatttcccggcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATAAGCACCATTGTGAt                                                                                                          >  2:929641‑M2/107‑143 (MQ=255)
                                      tACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                       >  2:273621‑M2/1‑107 (MQ=255)
                                      aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAtttt                                                                                                       <  2:367614‑M2/40‑1 (MQ=255)
                                        gcagaatcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAtttttt                                                                                                     <  1:259019‑M2/42‑1 (MQ=255)
                                        cTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                     >  1:910124‑M2/1‑105 (MQ=255)
                                          tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTa                                                                                                   <  2:619297‑M2/44‑1 (MQ=255)
                                          tgattcaaggcatgtacgggagaaaaaatccgcgcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTa                                                                                                   <  2:858742‑M2/44‑1 (MQ=255)
                                           gatacaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAg                                                                                                  <  1:843700‑M2/45‑1 (MQ=255)
                                              tgtgCGTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                               >  1:95749‑M2/1‑99 (MQ=255)
                                              tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAgctg                                                                                               >  1:438877‑M2/96‑143 (MQ=255)
                                              ggggcttGATGAGGCGCGAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                               >  2:42076‑M2/4‑99 (MQ=255)
                                               caaggcatttacggtagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAgctgc                                                                                              <  2:371318‑M2/49‑1 (MQ=255)
                                                aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAgctgct                                                                                             >  2:705292‑M2/94‑143 (MQ=255)
                                                  ggcggttacgggagaaaacatcggctccaacaggaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTtagctgctgt                                                                                           <  1:211103‑M2/52‑3 (MQ=255)
                                                  ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCttt                                                                                           <  2:299839‑M2/52‑1 (MQ=255)
                                                   ttAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACCGACTAAggcaggtgcgaccaagtccctggtctgcgctcacgtttgtcatctggag                                                                                          <  1:191380‑M2/143‑50 (MQ=255)
                                                   gcagtaacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTg                                                                                          <  1:390964‑M2/53‑1 (MQ=255)
                                                     atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGTtcctttttt                                                                                        >  2:413783‑M2/89‑140 (MQ=255)
                                                      tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTg                                                                                       <  1:260998‑M2/56‑1 (MQ=255)
                                                        tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGc                                                                                     <  1:954908‑M2/58‑1 (MQ=255)
                                                        tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCACGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGc                                                                                     <  1:622056‑M2/58‑1 (MQ=255)
                                                        tacgcgagaaaaaaccaaattaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGc                                                                                     <  1:735761‑M2/58‑1 (MQ=255)
                                                         atgCTCAAGCTGAGCGCCCCGCTTGGCGAGAGCCGACCGCAGAAGCAGGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                                                                    >  2:905523‑M2/1‑88 (MQ=255)
                                                            ggagaaggattcggcgcaaacatgaagaaaggaaaggcctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGc                                                                                 <  2:908021‑M2/62‑1 (MQ=255)
                                                            ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTACGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGATTTGCTGCCCTGc                                                                                 >  2:49632‑M2/82‑143 (MQ=255)
                                                              agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTc                                                                               <  1:618091‑M2/64‑1 (MQ=255)
                                                               gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagaagagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCa                                                                              <  1:439076‑M2/65‑1 (MQ=255)
                                                                aataaaacgccAGGGTTGCCGATAGCCAACGGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                             >  1:434875‑M2/5‑81 (MQ=255)
                                                                aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCac                                                                             >  1:118759‑M2/78‑143 (MQ=255)
                                                                aGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCAGGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                             >  1:933346‑M2/1‑81 (MQ=255)
                                                                 gTTAAACTCCACGCTTGCCGATAGCCAACAGCAGGCTCATGTATTGTGTCCGGTGCGACTGACCACAACCAATCAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcctctggagccatagcacagggg                                                                            <  2:776516‑M2/143‑64 (MQ=255)
                                                                  ttAAGCTCCTCGCGTGCCGATGGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgataggggatcatgtttgtcatctggagccatagaacagggtt                                                                           >  2:220915‑M2/1‑79 (MQ=255)
                                                                  aaaaggagctcgaacatgatgaaatggagtgactgaggcagccgagaagaatgtgcccgcgtattcgcaccttccCTAAGTAAGATGGGGAAAGCAGGAGCACCATTGTGAGTTTTTTAGCTGCTTTGCTGGCCTGCTCacta                                                                           <  2:658848‑M2/68‑1 (MQ=255)
                                                                     aaCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                                                        <  2:350368‑M2/143‑68 (MQ=255)
                                                                       cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGCTTTTTTTAGCTGCTTTGCTGGCCTGCCCACTACTTGc                                                                      >  1:742704‑M2/71‑143 (MQ=255)
                                                                         gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCACTGTGATTTTTTTAGCTGCTTTGCTGGCCCGCTCGCTGCTTGCgg                                                                    >  2:133579‑M2/69‑143 (MQ=255)
                                                                         ccACGCTCGCCTATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                    >  2:76618‑M2/1‑72 (MQ=255)
                                                                          ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCggg                                                                   <  2:743965‑M2/76‑1 (MQ=255)
                                                                          cACGCTTGCCGCTAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                   >  1:40564‑M2/1‑71 (MQ=255)
                                                                             aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTCGCGGGCTg                                                                >  1:241185‑M2/65‑143 (MQ=255)
                                                                               ttGCCGCTAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                              >  2:506410‑M2/1‑66 (MQ=255)
                                                                               ttGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                              <  1:316110‑M2/143‑78 (MQ=255)
                                                                                catgaagaaatgacatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCt                                                             <  2:224920‑M2/82‑1 (MQ=255)
                                                                                catgaagaaatgaaatgactgagtcagccgagaagaattgccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCt                                                             <  2:728799‑M2/82‑1 (MQ=255)
                                                                                    aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACCACTGGCGGGATGGCTGATa                                                         >  1:896374‑M2/58‑143 (MQ=255)
                                                                                       agcaattcgcagattCATGTTTTTTGTGTGGTGCGACTGACTGCGCATGACAGACGAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac                                                      >  1:273946‑M2/8‑58 (MQ=255)
                                                                                       aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                      <  1:705292‑M2/89‑1 (MQ=255)
                                                                                       aGCCAACCGCAGAGTCGAGGATTTTGTTCGGTGCGACTTACCTCGCTTGATAGACTAAggaatgtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac                                                      >  1:479082‑M2/1‑58 (MQ=255)
                                                                                       aGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac                                                      >  2:300439‑M2/1‑58 (MQ=255)
                                                                                           gaaatgaccgagtcagccgagaagaatttccccgcttaatcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATGTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGc                                                  <  2:304399‑M2/93‑1 (MQ=255)
                                                                                           aaCCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaccaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcacaatgagtcaccaacttaccttc                                                  <  2:400531‑M2/143‑90 (MQ=255)
                                                                                               tgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCAAGATGGGGAAAGGATTTTCACCTTTGTGATTTTTTTAGCTTCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGtgcgccc                                              >  2:680005‑M2/47‑140 (MQ=255)
                                                                                                gactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGCTGGCTGATAAAAGTGCGATcc                                             >  1:266777‑M2/46‑143 (MQ=255)
                                                                                                cAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                             <  1:524638‑M2/143‑95 (MQ=255)
                                                                                                 gctgagtcagccgagaagaatttccccgcttagtcggaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCa                                            <  2:538767‑M2/99‑1 (MQ=255)
                                                                                                     tCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacggtg                                        <  2:57898‑M2/143‑100 (MQ=255)
                                                                                                          tATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcgtctggagccatagaacagggttcatcctgagtcgtcaccttaccttcgccgacagtgatttc                                   <  1:483074‑M2/143‑105 (MQ=255)
                                                                                                           ccgagaagaatttccccgcttatgcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCTAGACGGCGTCa                                  <  2:530229‑M2/109‑1 (MQ=255)
                                                                                                            ttGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatc                                                                                                           >  1:501414‑M2/1‑37 (MQ=255)
                                                                                                            ttGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatc                                                                                                           <  2:501414‑M2/69‑33 (MQ=255)
                                                                                                             gagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATGAACGTGCGATCCAGACGGCGCCAGc                                >  2:47337‑M2/33‑143 (MQ=255)
                                                                                                              gcgtccGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtctctgatatgagatcatgtttgtcatctggagccatagaacatggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                               >  1:200821‑M2/3‑35 (MQ=255)
                                                                                                                aagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATGTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCtga                             >  1:201368‑M2/30‑142 (MQ=255)
                                                                                                                   cGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag                          <  1:930481‑M2/143‑114 (MQ=255)
                                                                                                                   aatgtccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCt                          <  1:327528‑M2/117‑1 (MQ=255)
                                                                                                                     tttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTCCTTGCGGGATGGCTGATGCAAGTGCGATCCATGCGGCGTCAGCTGCCCTgg                        >  2:357885‑M2/25‑143 (MQ=255)
                                                                                                                     tttacccgcttatacgcaccggccCGAAGTGAGAGGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTgg                        <  1:148754‑M2/119‑1 (MQ=255)
                                                                                                                         gACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaaatagaattcagcagtaagcgccgt                    <  2:729440‑M2/143‑120 (MQ=255)
                                                                                                                          aCTGACCACGCCTGACAGACTAAggaacgtgcgaaccagtccctgatatgagatcatgtttgtcatctggagccatagaccagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                   >  2:648605‑M2/1‑23 (MQ=255)
                                                                                                                                cACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacacggctcatcatgagtcatcaacttaccttcgccgaccgtgaattcagcagtacgcgccgccacaccc             <  2:752660‑M2/143‑127 (MQ=255)
                                                                                                                                 aCGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtaatcaacttaccttcgccgacagtgaattcagcagtacgcgccggcaggccag            <  1:307027‑M2/143‑128 (MQ=255)
                                                                                                                                   cgacccttccCGAAGGAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgc          <  1:294681‑M2/133‑1 (MQ=255)
                                                                                                                                      tGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgattgtccgctgtagccatcaaacaacatagttcatggggcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag       <  1:701240‑M2/143‑133 (MQ=255)
                                                                                                                                        cttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATg     >  1:93128‑M2/6‑143 (MQ=255)
                                                                                                                                        cttccCTAAGTAAGATGGGGAAAGCATGAGCACCATGGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTTACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATg     >  1:619094‑M2/6‑143 (MQ=255)
                                                                                                                                         ttcccTAAGTAAGATGGGGAAAGAATGAGCACCATTGTGATTTTTTTAGTTGCGTTGCTGGCGTGTTCACTACTTGCGATATGGCTGATAAAAGTGCGATGCTAACGTCGTAAGCTGCACTTGAACAACGCACGCGCGGATgc    >  2:757347/5‑143 (MQ=255)
                                                                                                                                           ccCTAAGTAAGATGTGGAAAGCATGAGCACTATTTTGATTTTTTTAGCTGCTTTGATGGCCTGCTCACGAAGTGCGGGAGGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATgcgc  <  1:100024‑M2/141‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                            
GATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGC  >  NC_000913/3526308‑3526589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.