Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,375,828 IS186 (+) +4 bp coding (132‑135/963 nt) menC ← O‑succinylbenzoyl‑CoA synthase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2375828 =1 (0.020)56 (0.880) 47/274 0.3 98.2% coding (135/963 nt) menC O‑succinylbenzoyl‑CoA synthase
?NC_000913 = 2515617 NA (NA)noncoding (1345/1345 nt) IS186 repeat region
* ? NC_000913 = 23758311 (0.020)73 (1.140) 61/274 0.0 98.6% coding (132/963 nt) menC O‑succinylbenzoyl‑CoA synthase
?NC_000913 2514273 = NA (NA)noncoding (1/1345 nt) IS186 repeat region

Only 100 of 132 total aligned reads displayed.

CTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATT  >  NC_000913/2375686‑2375970
                                                                                                                                              |                                                                                                                                              
cTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGgag                                                                                                                                                <  1:457260/143‑1 (MQ=255)
  tggttactggcggccattcgtgggacagtatctctgacagcctacaaaacgcaattggagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGAt                                                                                                                                              >  2:407362‑M1/141‑143 (MQ=255)
    cAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGCGATCt                                                                                                                                            >  2:433698‑M1/1‑142 (MQ=255)
          acaGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccata                                                                                                                                      <  2:865409‑M1/143‑8 (MQ=255)
           gtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCa                                                                                                                                     <  1:302640‑M1/12‑1 (MQ=255)
              gccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCAccc                                                                                                                                  <  1:729181‑M1/15‑1 (MQ=255)
              cTTACGCCCAAGGCCACGCAAGGCATCTGCGGCAGCTCGCAATCGCCCGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcg                                                                                                                                  <  1:888901‑M1/143‑12 (MQ=255)
                cattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCtt                                                                                                                                <  2:441845‑M1/17‑1 (MQ=255)
                 attcgtgggacagtatccctgacagcctacaaaacgcaattgacgaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTc                                                                                                                               >  1:862057‑M1/126‑143 (MQ=255)
                  ttcgtgggacagtatccctgacagcctacaaaacgcaattgacgaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttccgatggttcaacccttaagttagcgcttatgggaGCTCTCCCCCCCCCCTTcg                                                                                                                              <  1:731486‑M1/19‑1 (MQ=255)
                   gCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCGGGTTTCCTGACTGAAGCCCGGCGGTGGGGAGGTCtcccataagcgctagg                                                                                                                             >  1:949831‑M1/1‑127 (MQ=255)
                   gCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGACTCCCGGCCGTGGGGAGATCTCCCCCCCCCCTTctc                                                                                                                             >  1:4015/1‑141 (MQ=255)
                       acgtccacggTAGGCCTCTGCGGTCGCTCGCACTCGCCTGCCAGCCGGTGATTTGCCCAGGCAAGCAGCACACTCTGCGCCTCTGCCCAGGTGTCCTGACGGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaa                                                                                                                         <  2:569066‑M1/139‑21 (MQ=255)
                        aGGCCCCGGGTGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTGTTTACCCAGGCAAGCAGCACACGTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccatcagcgctaacttaag                                                                                                                        <  2:1135318‑M1/143‑22 (MQ=255)
                        aGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaag                                                                                                                        <  1:1131121‑M1/143‑22 (MQ=255)
                         gacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGc                                                                                                                       >  1:1106483‑M1/118‑143 (MQ=255)
                          gCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCCCACTTTGCGCCTCTTCCCAGGTTTCTTGACTGAAAACCGGCAATGAGAAAATCtcccataaacgctaacttacagg                                                                                                                      >  1:928641‑M1/1‑120 (MQ=255)
                          gCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCATGTTTCCTGACTGAAGCCCGGCAGTGGGGAGAGCtcacataagcgctcccctaaggg                                                                                                                      >  1:43865‑M1/1‑120 (MQ=255)
                          gCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGCTTCCTGACTGAAGCCCGGCAGCGGGGAGATCtcccataagcgccaacttgagcg                                                                                                                      >  2:934512‑M1/1‑120 (MQ=255)
                             gtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGACTTc                                                                                                                   <  1:306426‑M1/30‑1 (MQ=255)
                             aCGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGCTATTTACCCAGCCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGCCAGTGCGGAGATCtcccataagcgctaacttaaggaccg                                                                                                                   >  2:690775‑M1/1‑117 (MQ=255)
                               atccctgacagcctacaaaacgcaattgaagaacgcggggcatcgtcgtagcgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCCCCCTTCGCGCTCGCCTTCAc                                                                                                                 <  1:238010‑M1/32‑1 (MQ=255)
                                 aaGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggt                                                                                                               <  1:319412‑M1/143‑31 (MQ=255)
                                 aaGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCccccataagcgctaacttaagggttgtggt                                                                                                               >  2:311869‑M1/1‑113 (MQ=255)
                                   ctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAg                                                                                                             <  1:841943‑M1/36‑1 (MQ=255)
                                      aTCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattac                                                                                                          >  1:906062‑M1/1‑108 (MQ=255)
                                         tGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATGTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCGGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcc                                                                                                       <  2:128429‑M1/143‑39 (MQ=255)
                                          gCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagggctaacttaagggttgtggtattacgcct                                                                                                      >  1:999366‑M1/1‑104 (MQ=255)
                                          gCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCAGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgccc                                                                                                      >  1:606176‑M1/1‑104 (MQ=255)
                                                aaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGc                                                                                                >  1:755975‑M1/95‑143 (MQ=255)
                                                 cTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatga                                                                                               <  1:866527‑M1/143‑47 (MQ=255)
                                                 aacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCCGGCAAACATACAGcc                                                                                               <  1:774178‑M1/50‑1 (MQ=255)
                                                  tCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttg                                                                                                                   >  2:749070‑M1/1‑96 (MQ=255)
                                                  tCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttg                                                                                                                   <  1:749070‑M1/122‑27 (MQ=255)
                                                  tCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGCTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatggt                                                                                              >  2:79986‑M1/1‑96 (MQ=255)
                                                     cAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgattta                                                                                           <  2:951516‑M1/143‑51 (MQ=255)
                                                      aaTCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTAACTGAAGCCCGGCAGTGGGGAGAACtaccataagcgctaacttaagggttgtggtattaagcctgataggatctaa                                                                                          >  1:1019405‑M1/1‑92 (MQ=255)
                                                        tCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGCAGCCCGGCCGTGGGGAGATCtcccataaacgcaaacttaaggaatgtggtattacgcctgatatgataaaacg                                                                                        >  1:854007‑M1/1‑90 (MQ=255)
                                                         tgaagaacgcgcggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaggttagcgctgatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCgg                                                                                       >  2:221838‑M1/86‑143 (MQ=255)
                                                         tgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCgg                                                                                       >  1:384256‑M1/86‑143 (MQ=255)
                                                           ccTGCCAGCCAGTTATTTGCCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCttccataagcgctaacttaagggttgtggtattacgcctgatatgctttaacgtgc                                                                                     <  2:820325‑M1/143‑57 (MQ=255)
                                                             gcacccgagccatcgtcctaacggggcacccaggcgtcgcattcttcagatgcttcaacccttacgtcagcgctgatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGttt                                                                                   >  2:162868‑M1/82‑143 (MQ=255)
                                                              gccagccaGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGCTCtcccataagcgctaacttaagggttgtggtattacggctggtatgatttatcgtgccga                                                                                  >  1:667000‑M1/1‑84 (MQ=255)
                                                               tcgcgaggcattgtcttaacggggcaccgaggcgtcgcattcttcagatggttcaacccttcagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGttttt                                                                                 >  2:109779‑M1/80‑143 (MQ=255)
                                                               ccagccagTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgat                                                                                 <  2:413393‑M1/143‑61 (MQ=255)
                                                               acgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGttttt                                                                                 <  2:491188‑M1/64‑1 (MQ=255)
                                                                 gcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTaa                                                                               <  1:576396‑M1/66‑1 (MQ=255)
                                                                  gccagTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaa                                                                              >  1:789264‑M1/1‑80 (MQ=255)
                                                                  cgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCGTTCACGCAGGCAAACATACAACCCGGCGCGGGGTGTTAAc                                                                              <  2:843490‑M1/67‑1 (MQ=255)
                                                                   ccagTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggctgtggtattactcctgatatgatttaacgcgccgctgact                                                                             >  1:1097767‑M1/1‑79 (MQ=255)
                                                                     ggcatcggcttaacgcggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGc                                                                           >  2:1057719‑M1/74‑143 (MQ=255)
                                                                       ttATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacgtaagggatggggtgttacgcccgatgtgattgaacgtgccgatgaatcact                                                                         >  1:510577‑M1/1‑75 (MQ=255)
                                                                          cgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagtcagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTc                                                                      <  1:753704‑M1/75‑1 (MQ=255)
                                                                            tACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcac                                                                    >  1:88857‑M1/1‑70 (MQ=255)
                                                                            tACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcac                                                                    <  1:519452‑M1/143‑74 (MQ=255)
                                                                              ttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgagaGATCTCCACCCACCATTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCCCCGgtcgccg                                                                  <  2:417282‑M1/79‑3 (MQ=255)
                                                                              gtaacgaggcaccgaggcggcgcattctgcagacggttcaacccttaagttagcgcgtatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCgcgc                                                                  >  1:552947‑M1/65‑143 (MQ=255)
                                                                               taacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCa                                                                 >  1:409843‑M1/64‑143 (MQ=255)
                                                                               ccAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCTCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtcccgctcgattcatctcacgat                                                                 >  2:160516‑M1/1‑67 (MQ=255)
                                                                                  cggggctccgaggcgtcgcattcttcacatggttcaacgcttaagttagcgcttatgggaGCTCTCCGCCCACCGTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCAGGTTTTTAACCGCCTGTCGCGCAGaa                                                              >  2:724398‑M1/61‑143 (MQ=255)
                                                                                    cAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatcggctttaacgtcccgcagaattactctcaccataactg                                                            >  2:617927‑M1/1‑62 (MQ=255)
                                                                                      gcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGTCAAACATACCCCCCGTCGCGGGTTTTTGACCGCCTGACGGTCCGAaccac                                                          <  2:41224‑M1/87‑1 (MQ=255)
                                                                                          cgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCAccccc                                                      >  1:441845‑M1/53‑143 (MQ=255)
                                                                                           cacaCTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcccgataactgctcagca                                                     >  2:616323‑M1/1‑55 (MQ=255)
                                                                                             cacTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgataggatttaacgtgccgatgaattactctcacgataactgggcagcaat                                                   >  1:1005373‑M1/1‑53 (MQ=255)
                                                                                                tttGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtgccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatggattactctcacgataactggtcagcaattct                                                <  2:134369‑M1/143‑94 (MQ=255)
                                                                                                  cgccttctgcagatggctccacccgtaagcgagcgcttatggtaGGTCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACTGACGTCCCGTCGCGGGTTTGTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCAt                                              >  2:901224‑M1/45‑143 (MQ=255)
                                                                                                   gcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCCAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGCACCACCACCGCGTCCATg                                             <  2:690895‑M1/100‑1 (MQ=255)
                                                                                                   gcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTGTTTAACCGCCTGCCGCCCACAACCACCCCCGcctcccag                                             <  2:234726‑M1/100‑4 (MQ=255)
                                                                                                   gagccgCTTCCCAGGTTTCCTGACGGAAGCCCGGCAGGGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggc                                             <  1:243506‑M1/141‑97 (MQ=255)
                                                                                                      ttcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATgggg                                          >  2:813392‑M1/41‑143 (MQ=255)
                                                                                                       tcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAACCATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCCGACCCACCCCCGCGTCcatggaga                                         <  2:358006‑M1/104‑4 (MQ=255)
                                                                                                       tcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGa                                         <  1:247185‑M1/104‑1 (MQ=255)
                                                                                                        tctTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccata                                        >  1:720781‑M1/1‑42 (MQ=255)
                                                                                                         ttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATc                                       <  2:176780‑M1/106‑1 (MQ=255)
                                                                                                         ttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGCTTTTTAACCGCCTGTCGCGCAGGACCTCCCCCGCGTCCATGGGGATc                                       <  1:786661‑M1/106‑1 (MQ=255)
                                                                                                          ccagatggttcaacccttaagtgagcgcttatgggaGATCTCCCCCCCCCCTTCGCGCTCGCCCTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCt                                      >  1:1157624‑M1/37‑143 (MQ=255)
                                                                                                           tCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgccaaatgtcctttaacatgccgatgaattactctcacgataactggtcagcaattctggcccatattg                                     <  1:221249‑M1/143‑105 (MQ=255)
                                                                                                             ccAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggt                                   >  1:197535‑M1/1‑37 (MQ=255)
                                                                                                             ccAGGTTGCCGGAGTGAGGGCCGGGAGTGGGGGGATCtccgataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggt                                   <  2:885980‑M1/143‑107 (MQ=255)
                                                                                                              cAGGTTTCCTGACCGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggta                                  <  1:300340‑M1/143‑108 (MQ=255)
                                                                                                              atggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCa                                  <  1:361273‑M1/111‑1 (MQ=255)
                                                                                                                 cttcagcccttaaggtagcgcttatgggaGATCTCCCCCCACCCTCCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGGCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCg                               >  2:1187902‑M1/30‑143 (MQ=255)
                                                                                                                  ctcaaccctgaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCGCGCCTTCACGCACGCAAACAGACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCgg                              >  2:238010‑M1/29‑143 (MQ=255)
                                                                                                                    tCCTGACTGGAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccg                            <  1:1075647‑M1/143‑114 (MQ=255)
                                                                                                                      ctgactgaAGCCCGGCAGTGGGGAGATCtcccataagcgctaagttaagggttgtggtattacgcgtgagatgatttaacgtgcagatgaattactctcaagataagtggtgagcaatgttgggctatatttgtaagcccgaa                          >  2:1025272‑M1/1‑28 (MQ=255)
                                                                                                                      ctgactgaAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcgcatattcataagcccgca                          >  1:433803‑M1/1‑28 (MQ=255)
                                                                                                                           tgaAGCTCGGCGTTGTGGAGATCtcccataagcgctaccttaagggtggtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaact                     <  2:750965‑M1/143‑121 (MQ=255)
                                                                                                                            gaAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactg                    <  1:1154286‑M1/143‑122 (MQ=255)
                                                                                                                             agttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTgcgc                   >  1:632558‑M1/18‑143 (MQ=255)
                                                                                                                             aaGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgcc                                                                                    >  2:1055619‑M1/1‑21 (MQ=255)
                                                                                                                             aaGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgcc                                                                                    <  1:1055619‑M1/78‑58 (MQ=255)
                                                                                                                                tagcgctgatgggaGATCTCCCCCCACCGTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTACCCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCt                >  1:517022‑M1/15‑143 (MQ=255)
                                                                                                                                   cgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATATCTGCGCGCTACg             >  2:252755‑M1/12‑143 (MQ=255)
                                                                                                                                    gtagtGGGGAGTTCtgccttaagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttc            <  2:1135683‑M1/141‑130 (MQ=255)
                                                                                                                                    gcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGc            <  1:669827‑M1/133‑1 (MQ=255)
                                                                                                                                      ttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGTACAAACCCCGCGTCCATGGGGAGCAGCCAGCGGTCTACCTccgcgctcccccc          <  2:774395‑M1/135‑7 (MQ=255)
                                                                                                                                      aGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgcagaactggatactgcgg          >  1:1149720‑M1/1‑12 (MQ=255)
                                                                                                                                          gggAGATCccccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacg      <  1:311869‑M1/143‑136 (MQ=255)
                                                                                                                                            gaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGa    >  1:225676‑M1/3‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
CTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATT  >  NC_000913/2375686‑2375970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.