New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1176583	49 (1.040)	4 (0.090)	4/272	6.5	8.0%	coding (1157/1200 nt)	lolC	lipoprotein‑releasing system transmembrane protein
	?	NC_000913	= 1176589	45 (0.990)					coding (1163/1200 nt)	lolC	lipoprotein‑releasing system transmembrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAGCCAGTTAAATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1176437‑1176583 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgGCAGCGCGCCATGAAGGGTAAAGCGTAGACAGCAGCGCGATAGCCATCGCCACCAGCGCAATAACAATGACCTGTAAAGGTTCGATAGCCACCGGCAGCGCCGCGCCATCAAGCAGGACGCCGATTATCGGCATCAGA  <  NC_000913/1176589‑1176452                                                                                                                                                                                                                                                                                               CAGCCAGTTAAATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGATCCTTTACAGGTCATTGTTATTTCGCTGGTTGCGATGGCTATAGCGCTGCTGTCTCCGCTGTCCCCTTCAT                                                                                                                                                >  2:404496/1‑143   GCCTGTTAAAGCATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCTAACCTTTACCGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGG                                                                                                                                              <  2:83863/143‑1    CCAGTTAAATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGC                                                                                                                                             <  1:374072/143‑1                   GATGCCGATAATCGGGGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGGCAGCGCGCCATGA                                                                                                                              <  2:666226/143‑1                              TCGGCGTCTTGCTTGATGGCGCGGCGCTGCCGTTGGGTGTCGAACCTTTGCAGGTCATTGTTCTTGCGCTGGTGGGGCTGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGGCAGCGCGCCATGAAGGGTAAAGCG                                                                                                                   <  2:585574/143‑1                                  CGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGGCAGCGCGCCATGAAGGGTAAAGCGTAGA                                                                                                               <  2:65736/143‑1                                       TGCTGGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTATGCTTTACCCTGCATGGCGGCAGCGCGCCATGAAGGGTAAAGCGTAGACAGCA                                                                                                          <  1:384139/143‑1                                                                                                                                               TGGCGGCAGCGCGCCATGAAGGGTAAAGCGTAGACAGCAGCGCGATAGCCATCGCCACCAGCGCAATAACAATGACCTGTAAAGGTTCGATAGCCACCGGCAGCGCCGCGCCATCAAGCAGGACGCCGATTATCGGCATCAGc  >  2:470383/1‑142                                                                                                                                               TGGCGGCAGCGCGCCATGAAGGGTAAAGCGTAGACAGCAGCGCGATAGCCATCGCCACCAGCGCAATAACAATGACCTGTAAAGGTTCGATAGCCACCGGCAGCGCCGCGCCATCAAGCAGGACGCCGATTATCGGCATCAGA  >  1:54085/1‑143                                                                                                                                                                                                                                                                                               CAGCCAGTTAAATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1176437‑1176583 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgGCAGCGCGCCATGAAGGGTAAAGCGTAGACAGCAGCGCGATAGCCATCGCCACCAGCGCAATAACAATGACCTGTAAAGGTTCGATAGCCACCGGCAGCGCCGCGCCATCAAGCAGGACGCCGATTATCGGCATCAGA  <  NC_000913/1176589‑1176452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.