New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1176583	49 (1.040)	4 (0.090)	4/272	6.5	8.0%	coding (1157/1200 nt)	lolC	lipoprotein‑releasing system transmembrane protein
	?	NC_000913	= 1176589	45 (0.990)					coding (1163/1200 nt)	lolC	lipoprotein‑releasing system transmembrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGTCGGCGAAG  >  NC_000913/1176447‑1176721                                                                                                                                               |                                                                                                                                     aataatCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCCTTACCCTTCATGGCGCGCTgc                                                                                                                                      >  2:93264/1‑143 (MQ=255)      tCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCa                                                                                                                                 <  1:54085/143‑1 (MQ=255)      gcTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCa                                                                                                                                 <  2:470383/142‑1 (MQ=255)        tGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACt                                                                                                                               <  1:489324/143‑1 (MQ=255)                     cGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAgg                                                                                                                  >  1:220654/1‑143 (MQ=255)                         gcccTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCGTCATGGCGCGCGACCGCCCCTCACCCCACTgccgcgtg                                                                                                              >  2:48190/3‑136 (MQ=255)                            cTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACg                                                                                                           >  1:811559/1‑143 (MQ=255)                              gCTTGCTGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGtt                                                                                                         <  2:817906/143‑1 (MQ=255)                               ctggATGGCGCGGCGCGGCCGGTGGCGATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTa                                                                                                        <  2:551242/140‑1 (MQ=255)                                        gcggcgcTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTCCTCTGTAGGCTGGATCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCGTGACGTTACGACTAAgg                                                                                               >  2:203744/1‑142 (MQ=255)                                        gcggcgcTGCCGGTGGCCATCGAAGCTTTGCAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGa                                                                                               <  2:535629/143‑1 (MQ=255)                                            cgcTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCt                                                                                           <  1:645197/143‑1 (MQ=255)                                                     tGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATg                                                                                  <  1:553385/143‑1 (MQ=255)                                                      ggcttgtgAACCTTCACAGGCCATTGTTGTTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGc                                                                                 <  1:733084/136‑1 (MQ=255)                                                        cgtgcggacttttACTGGTCGGTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGGTTTGTACGCTTTAGCCTTCTTGGCGGTCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGa                                                                               <  2:56013/133‑1 (MQ=255)                                                         tATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCGTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGAc                                                                              >  2:606584/1‑143 (MQ=255)                                                          aTCGAACCTTTACAGGTCATTGTTATTGCGCTGGGGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACa                                                                             <  2:347751/143‑1 (MQ=255)                                                            gggaCCGTTACGGGTCATTGTGATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTGTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAAc                                                                           <  2:87397/140‑1 (MQ=255)                                                               aCCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCtg                                                                        >  1:703264/1‑143 (MQ=255)                                                                ccTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCtgt                                                                       <  1:138738/143‑1 (MQ=255)                                                                    tgcAGGGCATTGTCATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTTAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCaa                                                                   <  1:96343/141‑1 (MQ=255)                                                                     aCAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCaaa                                                                  <  2:655147/143‑1 (MQ=255)                                                                      ccggTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAAc                                                                 <  2:728544/141‑1 (MQ=255)                                                                      cAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATAGCACGATGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAAc                                                                 >  1:390763/1‑143 (MQ=255)                                                                         gTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCACTGCGACAACCTGTGCAAACGCt                                                              >  2:525531/1‑143 (MQ=255)                                                                                 tcttGCGCTGGTGGCGATGGCTATCGCGCTGCTTTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGaa                                                      <  1:74516/141‑1 (MQ=255)                                                                                 gaTTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGaa                                                      <  1:435905/142‑1 (MQ=255)                                                                                  aTTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAg                                                     <  1:287411/143‑1 (MQ=255)                                                                                       gcTGGCGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCCTGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAgt                                                <  1:645054/143‑1 (MQ=255)                                                                                        cTGGTGGTGGTGGCTATCGCGCTGCTGTCGACGCTTTCCCCTTCATGGCCCACTGACGGCACTCATCCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAgtg                                               <  2:95466/143‑1 (MQ=255)                                                                                         tggtggCGATCGCTATCGCGCGGCTGTCCACGCTGTACCCTGCATGGCGCGCTGCCGCCACTCAAACCGCTGAGGCTTTTCGTTATGAATAAGATCCGGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAgtgt                                              <  2:543669/143‑1 (MQ=255)                                                                                             ggCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTTAGGCTTTTCGTTGTGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCaa                                          <  1:422836/143‑1 (MQ=255)                                                                                               cGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGGCAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAAc                                        <  1:555199/143‑1 (MQ=255)                                                                                               cGATGGCTATCGCGCGGGTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAAc                                        <  2:162353/143‑1 (MQ=255)                                                                                                 aTGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCACTGCGACAACCTGTGCAAACGCTCAAAGGAAGGCAGTGTGAAAACCg                                      >  1:340437/1‑143 (MQ=255)                                                                                                  tGGCTATCGCGCTGCGGTCTACGCTGTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGa                                     <  2:584934/143‑1 (MQ=255)                                                                                                   ggctggcgcgCTGCTGTCTACGCTTTACCCGTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTGATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGAt                                    <  2:358880/137‑1 (MQ=255)                                                                                                       aTCGCGCTGCTGTCTACGCTTCACCCTTCAGGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGGTATGAAGAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGtgc                                <  1:85808/143‑1 (MQ=255)                                                                                                          gcgcTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTCATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGATATCAGGAAGGCAGTGTGCAAACCGAAGtgctgc                             >  2:815097/1‑143 (MQ=255)                                                                                                          gcgcCGCTGCCTATGCTTTTCCCGTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAGGTTCCTGTTGCAATGCGACAACCGGTGCAAACGCTATGAGGAAGGCAGTGTGCAAACCGATGtgctgc                             <  2:829028/143‑1 (MQ=255)                                                                                                               gttgtcgtcccgttACCATTCGTGGCCCGTTCTCACCATCCAATCCGCCCATGCTTGACGTTATGAATAAGATACTGTTGCGATGCGCCAACCTGTGCCGGCTCAATCAGGAAGGCAGTGTGCAAATCGATGGGTTGTACAAt                        <  2:537459/131‑1 (MQ=255)                                                                                                                   tCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTCTGAATAAGAGCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGACGGCAGTGTGTAAACCGCTGTGCGGCACACTGTCa                    >  1:824435/1‑143 (MQ=255)                                                                                                                      cccccttACCCTGCACGGCTCGCTGCTGACACTCAACCCGCTGAGACTTTCCGGTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGtt                 <  2:151109/138‑1 (MQ=255)                                                                                                                               ccTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCCGCGTCg        >  2:755141/1‑143 (MQ=255)                                                                                                                               ccTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGTCg        >  1:677680/1‑143 (MQ=255)                                                                                                                                 ttCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATTCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGACGGc      >  2:11601/1‑143 (MQ=255)                                                                                                                                 ttCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCTAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTTAGTTTCAGCGTCGGc      >  1:414957/1‑143 (MQ=255)                                                                                                                                     tGGCGCGCTGCCGGCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCGGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGTCGGCGAAg  <  2:474961/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                                     AATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGTCGGCGAAG  >  NC_000913/1176447‑1176721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.