New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1176583	49 (1.040)	4 (0.090)	4/272	6.5	8.0%	coding (1157/1200 nt)	lolC	lipoprotein‑releasing system transmembrane protein
	?	NC_000913	= 1176589	45 (0.990)					coding (1163/1200 nt)	lolC	lipoprotein‑releasing system transmembrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGTTAAATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGTCGGCGAAG  >  NC_000913/1176442‑1176721                                                                                                                                              |                                                                                                                                           cggtAACTAAGCTGATGCCCAGAATCGGCGTCCTGCTTGATGGCGCGGCGCGGCCGGTGGCTATCGAACCGTTACACGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGgcgc                                                                                                                                           <  1:26894/140‑1 (MQ=255)      aataatCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCCTTACCCTTCATGGCGCGCTgc                                                                                                                                      >  2:93264/1‑143 (MQ=255)           tCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCa                                                                                                                                 <  1:54085/143‑1 (MQ=255)           gcTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCa                                                                                                                                 <  2:470383/142‑1 (MQ=255)             tGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACt                                                                                                                               <  1:489324/143‑1 (MQ=255)              gATGCCGATAATCGGGGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGgcggcagcgcgccatga                                                                                                                              <  2:666226/143‑15 (MQ=255)                          cGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAgg                                                                                                                  >  1:220654/1‑143 (MQ=255)                              gcccTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCGTCATGGCGCGCGACCGCCCCTCACCCCACTgccgcgtg                                                                                                              >  2:48190/3‑136 (MQ=255)                                 cTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACg                                                                                                           >  1:811559/1‑143 (MQ=255)                                   gCTTGCTGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGtt                                                                                                         <  2:817906/143‑1 (MQ=255)                                    ctggATGGCGCGGCGCGGCCGGTGGCGATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTa                                                                                                        <  2:551242/140‑1 (MQ=255)                                             gcggcgcTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTCCTCTGTAGGCTGGATCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCGTGACGTTACGACTAAgg                                                                                               >  2:203744/1‑142 (MQ=255)                                             gcggcgcTGCCGGTGGCCATCGAAGCTTTGCAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGa                                                                                               <  2:535629/143‑1 (MQ=255)                                                 cgcTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCt                                                                                           <  1:645197/143‑1 (MQ=255)                                                          tGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATg                                                                                  <  1:553385/143‑1 (MQ=255)                                                           ggcttgtgAACCTTCACAGGCCATTGTTGTTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGc                                                                                 <  1:733084/136‑1 (MQ=255)                                                             cgtgcggacttttACTGGTCGGTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGGTTTGTACGCTTTAGCCTTCTTGGCGGTCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGa                                                                               <  2:56013/133‑1 (MQ=255)                                                              tATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCGTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGAc                                                                              >  2:606584/1‑143 (MQ=255)                                                               aTCGAACCTTTACAGGTCATTGTTATTGCGCTGGGGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACa                                                                             <  2:347751/143‑1 (MQ=255)                                                                 gggaCCGTTACGGGTCATTGTGATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTGTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAAc                                                                           <  2:87397/140‑1 (MQ=255)                                                                    aCCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCtg                                                                        >  1:703264/1‑143 (MQ=255)                                                                     ccTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCtgt                                                                       <  1:138738/143‑1 (MQ=255)                                                                         tgcAGGGCATTGTCATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTTAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCaa                                                                   <  1:96343/141‑1 (MQ=255)                                                                          aCAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCaaa                                                                  <  2:655147/143‑1 (MQ=255)                                                                           ccggTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAAc                                                                 <  2:728544/141‑1 (MQ=255)                                                                           cAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATAGCACGATGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAAc                                                                 >  1:390763/1‑143 (MQ=255)                                                                              gTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCACTGCGACAACCTGTGCAAACGCt                                                              >  2:525531/1‑143 (MQ=255)                                                                                      tcttGCGCTGGTGGCGATGGCTATCGCGCTGCTTTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGaa                                                      <  1:74516/141‑1 (MQ=255)                                                                                      gaTTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGaa                                                      <  1:435905/142‑1 (MQ=255)                                                                                       aTTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAg                                                     <  1:287411/143‑1 (MQ=255)                                                                                            gcTGGCGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCCTGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAgt                                                <  1:645054/143‑1 (MQ=255)                                                                                             cTGGTGGTGGTGGCTATCGCGCTGCTGTCGACGCTTTCCCCTTCATGGCCCACTGACGGCACTCATCCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAgtg                                               <  2:95466/143‑1 (MQ=255)                                                                                              tggtggCGATCGCTATCGCGCGGCTGTCCACGCTGTACCCTGCATGGCGCGCTGCCGCCACTCAAACCGCTGAGGCTTTTCGTTATGAATAAGATCCGGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAgtgt                                              <  2:543669/143‑1 (MQ=255)                                                                                                  ggCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTTAGGCTTTTCGTTGTGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCaa                                          <  1:422836/143‑1 (MQ=255)                                                                                                    cGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGGCAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAAc                                        <  1:555199/143‑1 (MQ=255)                                                                                                    cGATGGCTATCGCGCGGGTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAAc                                        <  2:162353/143‑1 (MQ=255)                                                                                                      aTGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCACTGCGACAACCTGTGCAAACGCTCAAAGGAAGGCAGTGTGAAAACCg                                      >  1:340437/1‑143 (MQ=255)                                                                                                       tGGCTATCGCGCTGCGGTCTACGCTGTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGa                                     <  2:584934/143‑1 (MQ=255)                                                                                                        ggctggcgcgCTGCTGTCTACGCTTTACCCGTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTGATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGAt                                    <  2:358880/137‑1 (MQ=255)                                                                                                            aTCGCGCTGCTGTCTACGCTTCACCCTTCAGGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGGTATGAAGAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGtgc                                <  1:85808/143‑1 (MQ=255)                                                                                                               gcgcTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTCATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGATATCAGGAAGGCAGTGTGCAAACCGAAGtgctgc                             >  2:815097/1‑143 (MQ=255)                                                                                                               gcgcCGCTGCCTATGCTTTTCCCGTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAGGTTCCTGTTGCAATGCGACAACCGGTGCAAACGCTATGAGGAAGGCAGTGTGCAAACCGATGtgctgc                             <  2:829028/143‑1 (MQ=255)                                                                                                                    gttgtcgtcccgttACCATTCGTGGCCCGTTCTCACCATCCAATCCGCCCATGCTTGACGTTATGAATAAGATACTGTTGCGATGCGCCAACCTGTGCCGGCTCAATCAGGAAGGCAGTGTGCAAATCGATGGGTTGTACAAt                        <  2:537459/131‑1 (MQ=255)                                                                                                                        tCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTCTGAATAAGAGCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGACGGCAGTGTGTAAACCGCTGTGCGGCACACTGTCa                    >  1:824435/1‑143 (MQ=255)                                                                                                                           cccccttACCCTGCACGGCTCGCTGCTGACACTCAACCCGCTGAGACTTTCCGGTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGtt                 <  2:151109/138‑1 (MQ=255)                                                                                                                                    ccTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCCGCGTCg        >  2:755141/1‑143 (MQ=255)                                                                                                                                    ccTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGTCg        >  1:677680/1‑143 (MQ=255)                                                                                                                                      ttCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATTCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGACGGc      >  2:11601/1‑143 (MQ=255)                                                                                                                                      ttCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCTAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTTAGTTTCAGCGTCGGc      >  1:414957/1‑143 (MQ=255)                                                                                                                                          tGGCGCGCTGCCGGCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCGGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGTCGGCGAAg  <  2:474961/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                           AGTTAAATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGTCGGCGAAG  >  NC_000913/1176442‑1176721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.