Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 3,815,859 | Δ82 bp | [rph]–[rph] | [rph], [rph] |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 3815859 | 3815940 | 82 | 65 [0] | [0] 65 | [rph]–[rph] | [rph],[rph] |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3815858 | 0 (0.000) | 62 (1.030) | 53/264 | 0.1 | 100% | pseudogene (24/48 nt) | rph | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH |
? | NC_000913 | 3815941 = | 0 (0.000) | pseudogene (609/669 nt) | rph | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH |
ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTC > NC_000913/3815717‑3816000 | acccctgtTTGCTAAGCGCAAATGCAATAACCTGGCGCTGATATGGTTTCATGCTTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCCGCGCCGCCTTCTGCc < 2:580937‑M1/140‑2 (MQ=255) acacCTGCTTGCTAAGCGCAAATTCAATAACCTGGCGGTGATATGGTTTCAGGCGTTCGCTCCTCATCTTACGTTTCCACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTGGCCAGCGCCGCCTTCTGCc < 1:394799‑M1/143‑2 (MQ=255) acCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTAC‑TTTCTACAG‑ACAAAAAGAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtc > 1:982873‑M1/1‑139 (MQ=255) ccTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtc < 1:574065‑M1/143‑5 (MQ=255) cTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAACAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCCTCTGCcgtcc > 2:430223‑M1/1‑138 (MQ=255) tgctcgccAAGCGCAAATTCAATAACCTGGCGCTGATATGGTATCGCGCCTTCGCCCCTCACCTTACTTTCCGACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCCGCcgtccc < 1:320901‑M1/143‑7 (MQ=255) gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTCAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccc > 1:367847‑M1/1‑136 (MQ=255) gcgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGACGACTCATCAGTCGCCTTAAAAACCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttca > 2:948711‑M1/1‑127 (MQ=255) gcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAACGCCGCCTTCTGCcgtccacagcacttcaat > 2:198710‑M1/1‑125 (MQ=255) aaaTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatga > 1:54587‑M1/1‑123 (MQ=255) aactcaaTAACCCGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgat < 1:157046‑M1/140‑22 (MQ=255) aaTTCAATAAACGGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTAT‑CAGAACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgat < 1:1169484‑M1/143‑22 (MQ=255) tCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcg < 1:193516‑M1/143‑25 (MQ=255) cAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgc < 2:54587‑M1/143‑26 (MQ=255) cTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACCAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGTCTTCTGCcgtcccctgcacttcaatgatgcgcccgtctt < 1:278497‑M1/143‑33 (MQ=255) ggCGCTGACATGGTTTCACGCCTTCGCGCCTCATCTTACTTCTCGACAG‑ACAAAAAAAAGGCGCCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCCGCcgtccgctgcacttcaatgatgcgcccgtcttcg < 2:301216‑M1/143‑35 (MQ=255) gcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtc < 1:633351‑M1/143‑38 (MQ=255) cTGATATGGTTTCATGCCTTCGCACCTCGTCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtca < 1:160312‑M1/143‑39 (MQ=255) tctggTCTCATGCCTGCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGACTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCagtcccctgcacttcaatgatgcgcccgtcttcggtcatcac < 2:199302‑M1/141‑43 (MQ=255) atGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcact > 2:256102‑M1/1‑100 (MQ=255) tttCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgt > 1:421968‑M1/1‑96 (MQ=255) tttCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcgggcatcactacgt > 1:562163‑M1/1‑96 (MQ=255) tCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttc > 1:385557‑M1/1‑94 (MQ=255) tCATGCCTTCGCTCCTCATCTTACTCCACCCCTA‑ACAGAATAAATGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttc < 1:796617‑M1/143‑50 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGTCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtgatcactacgttcat > 1:148138‑M1/1‑92 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgtgcat > 2:148481‑M1/1‑92 (MQ=255) gCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgt < 1:1073225‑M1/143‑54 (MQ=255) cTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcg > 1:1085449‑M1/1‑88 (MQ=255) tCGCTCCTGATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggt < 2:1106800‑M1/143‑58 (MQ=255) tcctcATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctct > 1:1093090‑M1/1‑82 (MQ=255) tcctcACCTTACTTTCCTTCAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacatcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctct < 1:1062350‑M1/143‑62 (MQ=255) ccctcacctcacTTTGCTACAG‑ACAAAAAAACGGCGACTCACCAGCCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacatcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctct < 1:1062675‑M1/142‑62 (MQ=255) ctcATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatttcggtctctgc > 2:838569‑M1/1‑80 (MQ=255) cATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcgg < 1:873016‑M1/143‑66 (MQ=255) tCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggca > 1:148341‑M1/1‑76 (MQ=255) tCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgtgcatgtcggtctctgcggca > 1:212274‑M1/1‑76 (MQ=255) tCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACGCATCAGTCGCCTTAAAAAGCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatatcgatctctgcaaca > 2:615851‑M1/1‑76 (MQ=255) ttttCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtct > 2:595076‑M1/1‑70 (MQ=255) cTACAG‑CCAAAACAACGGCGACGCATCAGTCGCCTTAAAACTCCGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacattcatgtcggtctctgcggcagagtcttcaa < 2:865952‑M1/143‑78 (MQ=255) aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtatt < 2:787808‑M1/143‑84 (MQ=255) aaaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtaatcactacgttcatgtcggtctctgcggcggtgtcttcaacgtattcc > 1:905159‑M1/1‑58 (MQ=255) aaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccag > 1:832282‑M1/1‑56 (MQ=255) aaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCAGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcgggctctgcggcagagtcttcaacgtattccag > 1:311953‑M1/1‑56 (MQ=255) aaaaaGGCGACTCATCTGTCGCCGTAAAACTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccaga < 1:135116‑M1/143‑89 (MQ=255) ggCGACTCATCAGTCGCCTTAAAAGTCAGTTTGCCAGCGCCGCCTTCTGCcgtctcctgcttttcaatgtttcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgca < 2:705645‑M1/143‑94 (MQ=255) cgtcgcatccgtcccCGTAACAACCAGTTCGCGTGCGCCGCCTTCTGCcgctccctgcacttcaattatgcgtccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaa < 2:1124395‑M1/138‑96 (MQ=255) atcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatacgcccgtcttcggccatcactacgttcacaacagtctattttgcagagacttcaccgtattcccgatcgcaaaccgctc > 2:517994‑M1/1‑42 (MQ=255) tcaCTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgtccatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttc < 1:838569‑M1/143‑103 (MQ=255) agacgccTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgc < 1:123939‑M1/140‑105 (MQ=255) aGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgttttccagatcgcaaaccgcttcgc > 1:950121‑M1/1‑39 (MQ=255) gTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgccccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgcc < 1:284392‑M1/143‑106 (MQ=255) cTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcacccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttca < 1:736623‑M1/143‑111 (MQ=255) ttcaaactcaGGTTGCCAGCTCCGCCTCCTCCcgtcccctgcacttcataactacgcccgtcttcggtcatcactacgttcatgtcggtcgctgccgcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcac < 2:191708‑M1/140‑112 (MQ=255) ttAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtccctccggcagagtcttcaacgtatcccagatcgcaacccgctcccccgctcac > 1:810031‑M1/1‑32 (MQ=255) aaTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagaggcttcaacggattccagatcgcaaaccgcttcgccgttcacaattc > 2:948689‑M1/1‑27 (MQ=255) cAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgctcttcaatgatgcgcccgtcttcggtcatcactactttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccga < 2:90266‑M1/143‑120 (MQ=255) cAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccga < 1:256102‑M1/143‑120 (MQ=255) gTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgctgcgccgagcacactcccgacc > 2:805587‑M1/1‑22 (MQ=255) gCCAGCGCCGCCTTCTGCcgtccccttcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctccgccagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcccacttccgaccgccc > 1:398386‑M1/1‑18 (MQ=255) cAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtctgcaacgtagtccacatcgcaaaccccctcgccgcccccacttccgacacaaacc > 2:1036360‑M1/1‑16 (MQ=255) aGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactg < 2:148341‑M1/143‑129 (MQ=255) cgccgcCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagctcgcaaaccgcttcgccgttcacaattccgacagaagctgcg > 1:1016728‑M1/1‑13 (MQ=255) gccTTCTGCcgtcccctgcacttccatgatgcgcccgtcttcggtcatcacgacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggcta < 1:1005839‑M1/143‑135 (MQ=255) ccTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcaccattccgacagaaactgcggctac > 1:207481‑M1/1‑8 (MQ=255) ccgtcccctgcccttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatccct < 2:922226‑M1/143‑143 (MQ=255) | ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAG‑ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTC > NC_000913/3815717‑3816000 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |