New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2731579	54 (1.260)	5 (0.130)	5/262	5.0	9.0%	intergenic (‑422/+21)	rrsG/clpB	16S ribosomal RNA of rrnG operon/protein disaggregation chaperone
	?	NC_000913	= 2731583	51 (1.290)					intergenic (‑426/+17)	rrsG/clpB	16S ribosomal RNA of rrnG operon/protein disaggregation chaperone
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2731427‑2731579 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacgagcccTTCGGGGCTCGTTTTTGTCTATAAGTTAGACGGAAAAGACTATATTTAAGATGTTTTGCCTGAAAAGTGAGCGAACGATAAAGTTTTTATATTTTTCGCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACA  <  NC_000913/2731583‑2731442                                                                                                                                                                                                                                                                                                         TTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAACGAAAAATATAAAAACTGTATCGTTCACTCACTTTTCAGGAAAAACATCATAAATATAGAATATACCGTCTAACTTATAGAAAA                                                                                                                                                          >  2:1287/1‑143     CCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAAC                                                                                                                                                      <  1:723899/143‑1        TTGATCCGTATCAGTGGTGGCGAAACAGAGGGAGGTAATCCCGCCTGACGAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAG                                                                                                                                                   <  1:66597/143‑1                           GCGCATTATCGGGAGTTATGCCCGCCTGACAATCGAAAAATATAAAAACCTTATCGTTCTGCCACCTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCTTCGGGGCTCGTTTTT                                                                                                                                <  1:360023/143‑1                               ATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCTTCGGGGCTCGTTTTTGTCT                                                                                                                            <  2:519390/143‑1                                      GGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCTTCGGGGCTCGTTTTTGTCTATAAGTT                                                                                                                     >  1:412545/1‑143                                          TTATGCCGGGCGGACAAGCGAAAAATATAAAAACTGTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCTTCGGGGCTCGTTTTTGTCTATAAGTTAGAC                                                                                                                 <  1:92820/143‑1                                                                                      GCTCACTTGTCAGGCAAAACATATTAACTATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCTTCGGGGCTCGTTTTTGTCTATAAGTTAGACGGAAAAGACTATATTTAAGATGTTTTGCCTGAAAAGTGAGCGAA                                                                     <  2:412545/143‑1                                                                                                                                                   CGAGCCGTTCGGGGCTCGTTTTTGTCTATAAGTTAGACGGAAAAGACTATATTTAAGATGTTTTGCCTGAAAAGTGAGCGACCGATAAAGTTTTTATATTGTTCGCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCA        <  2:130864/143‑1                                                                                                                                                     AGCCCTTCGGGGCTCGTTTTTGTCTATAAGTTAGACGGAAAAGACTATATTTAAGATGTTTTGCCTGAAAAGTGAGCGAACGATAAAGTTTTTATATTTTTCGCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACT      <  1:556999/143‑1                                                                                                                                                         CTTCGGGGCTCGTTTTTGTCTATAAGTTAGACGGAAAAGACTATATTTAAGATGTTTTGCCTGAAAAGTGAGCGAACGATAAAGTTTTTATATTTTTCGCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACA  >  1:350546/1‑143                                                                                                                                                                                                                                                                                                         TTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2731427‑2731579 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacgagcccTTCGGGGCTCGTTTTTGTCTATAAGTTAGACGGAAAAGACTATATTTAAGATGTTTTGCCTGAAAAGTGAGCGAACGATAAAGTTTTTATATTTTTCGCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACA  <  NC_000913/2731583‑2731442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.