Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,526,449 IS5 (+) +4 bp intergenic (‑300/‑17) nudE ← / → yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)78 (1.030) 62/284 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3526449 = 0 (0.000)intergenic (‑300/‑20) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein
* ? NC_000913 = 2290113NA (NA)82 (1.100) 58/282 0.2 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3526452 0 (0.000)intergenic (‑303/‑17) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

Only 100 of 163 total aligned reads displayed.

TGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAA  >  NC_000913/3526307‑3526591
                                                                                                                                              |                                                                                                                                              
tGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGTTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGacacac                                                                                                                                                >  1:952498/1‑143 (MQ=255)
 ggtgataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                               <  2:446410‑M2/2‑1 (MQ=255)
   tatcgcGCCCTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCACCCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACtaa                                                                                                                                             <  1:666964/138‑1 (MQ=255)
        cGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTGATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGCATCATGGATTGTGTCCGGTGCGACGGACCGCGGCTGGCAGAGTAAggaag                                                                                                                                        <  2:77008‑M2/143‑6 (MQ=255)
        cGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaag                                                                                                                                        <  1:454204‑M2/143‑6 (MQ=255)
            ttCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgc                                                                                                                                    >  1:1043999‑M2/1‑134 (MQ=255)
               aaatggcgcagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGa                                                                                                                                 <  1:148881‑M2/16‑1 (MQ=255)
               aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcgtattcgcaccttccCTAAGCAAGCTGGGGa                                                                                                                                 >  2:1144254‑M2/128‑143 (MQ=255)
                aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTACGGAAGCTGGGGaa                                                                                                                                >  2:803165‑M2/127‑143 (MQ=255)
                    gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgagaagaaattcacagcttattcgcacctgccCTACGTAACATGGGGAAAGCa                                                                                                                            >  2:1099585‑M2/123‑143 (MQ=255)
                     tttGCTATGAGCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtc                                                                                                                           >  1:911209‑M2/1‑125 (MQ=255)
                     cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCAt                                                                                                                           <  1:552173‑M2/22‑1 (MQ=255)
                        gCTATCTTCAGCGGTTACTGTGATGGGCTTGATGAGGCTCAGGTTGAGCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTACGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccct                                                                                                                        >  1:293423‑M2/1‑122 (MQ=255)
                         gaaacggtctaaataggccgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGc                                                                                                                       <  1:78959‑M2/26‑1 (MQ=255)
                          tATGATCAGCGTTTACTGTGATGTGCTTAATGCTGCTCAAGTTATACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctga                                                                                                                      >  1:393943‑M2/1‑120 (MQ=255)
                               tCCGCGGTTACTGTGATGTGCTTCATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACTGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                 >  2:1103133‑M2/1‑115 (MQ=255)
                               tCAGCGGTTACTGTGATGTGCTTAATGCTGCTCAAGTTAAACTCCACGCTTGCCGATCGCCAACCGCAGAATCCTGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGCCCAAggaaggtccggacaaggccctgctacga                                                                                                                 <  2:370226‑M2/143‑29 (MQ=255)
                               tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAACCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                 >  1:317529‑M2/1‑115 (MQ=255)
                               tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                 <  2:448906‑M2/143‑29 (MQ=255)
                               tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                 <  1:1117337‑M2/143‑29 (MQ=255)
                                 cgcGGTTAGTGTGCTGTGCTTTAGGGTGCTCAAGTTAAACTCCACGCTGGCCGCTAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTACggaaggtgcgaacaagtccctgatatgaga                                                                                                               >  2:881003‑M2/2‑113 (MQ=255)
                                  tcttttacttTGATGTGCTTAATTATTCTTAATTTAAACTCCACGCTTGCCCATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagat                                                                                                              >  1:17097‑M2/5‑112 (MQ=255)
                                       tACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                         >  1:417688‑M2/1‑107 (MQ=255)
                                       aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATtgtgactct                                                                                                         >  2:270102‑M2/104‑139 (MQ=255)
                                        cgctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAttttt                                                                                                        <  1:1205035‑M2/41‑1 (MQ=255)
                                         gctgattcaaggcatttacgggagaaaaaatcggatcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGCGCACCACTGCGCtttttt                                                                                                       >  2:346768‑M2/102‑143 (MQ=255)
                                         ctctGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                       >  1:975142‑M2/1‑105 (MQ=255)
                                          tgtgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                      <  1:611451‑M2/143‑40 (MQ=255)
                                          tgtgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                      <  1:449298‑M2/143‑40 (MQ=255)
                                          ctgattcaaggcctttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAttttttt                                                                                                      <  1:475104‑M2/43‑1 (MQ=255)
                                          ctgattcaaggcatttacgggagaaaaaatcggctccaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAttttttt                                                                                                      <  1:1059117‑M2/43‑1 (MQ=255)
                                           tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAGGCGTGAGCACCATGGTGATTTTTTTa                                                                                                     >  1:988328‑M2/100‑143 (MQ=255)
                                              aTGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat                                                                                                  <  1:1145273‑M2/143‑44 (MQ=255)
                                                gtgCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgcacacgcccctgatatgagatgatggttgggctcg                                                                                                <  2:1170540‑M2/143‑46 (MQ=255)
                                                 aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGaaa                                                                                                                               <  1:756591‑M2/18‑1 (MQ=255)
                                                      aaTGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatctgagatcatgtttgtcagctgcagcc                                                                                          <  2:724901‑M2/143‑52 (MQ=255)
                                                       tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTACATGCGTTGCTg                                                                                         >  2:730415‑M2/88‑143 (MQ=255)
                                                         tacgggagaaaaaatcttctcagacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGc                                                                                       <  2:164993‑M2/58‑1 (MQ=255)
                                                         gatgCTCAAGGTGAGGTAGACGGTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata                                                                                       >  2:1246420‑M2/1‑89 (MQ=255)
                                                            gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttgttcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGGTTTTTTTAGCTGCTTTGCTGGCCTg                                                                                    >  1:1224367‑M2/83‑143 (MQ=255)
                                                              tCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                  <  1:318902‑M2/143‑60 (MQ=255)
                                                               agaagacatcgggtcaagcgtgaaggaatggaatgactgagtcagccgagaagaatttccccgcttatgcgcaccttccCTTAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTc                                                                                 <  1:1364662‑M2/64‑1 (MQ=255)
                                                                gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGCTTTTTTTCGCTGCTTTGCTGGCCTGCCCa                                                                                >  2:845439‑M2/79‑143 (MQ=255)
                                                                aaGTTTACCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                >  1:1268318‑M2/1‑82 (MQ=255)
                                                                   ttAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTAACAGACTAAggaaggtgcgaacaagtccctgatatgagcacatgtttgtcatccggagcaatagaacagggta                                                                             <  2:491182‑M2/143‑65 (MQ=255)
                                                                       gcttcgcgctgggCGGTAGCCAACTGCGGGAGCATGTATTGTGTCCGGTGCGACTGACCACGGCTGACAGACTAAggaaggtgcgagcgagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                         >  2:560140‑M2/7‑75 (MQ=255)
                                                                       aCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                         >  1:600312‑M2/1‑75 (MQ=255)
                                                                          ccACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                      <  1:480904‑M2/143‑72 (MQ=255)
                                                                          ccACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgataggagagcatgttcgtcgtctggagccatagaaaagggttcatcatg                                                                      <  2:202684‑M2/143‑72 (MQ=255)
                                                                           cACGCTTGCCGATAGCCACCCGCGGAAGCATGTATTGTGCCCGGGGCGACTGACCGCGCCTGACAGACGAAggaaggtgcgcataagtccctgatatggtgtcaggtttgtcatctggagccatagaacagggttcatcatga                                                                     >  1:604905‑M2/1‑71 (MQ=255)
                                                                           cACGCTTGCCGATAGCCAACCGCAGTATCATGTATTGTGTCCGGTGCGACTGACCACGCGTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                     >  2:1004292‑M2/1‑71 (MQ=255)
                                                                           cACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCAAGCCTGACAGACTCAggaaggtgcgaacaagtccctgatatgagatcctgtttgtcatctggagccctagaacagggttcatcataa                                                                     <  1:998186‑M2/143‑73 (MQ=255)
                                                                           cACGCGTGCCGATAGCCAACCGCAGAAGCATGTAGTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgatcaagtccctgatatgagatcatgtttggcatctggagccatagaacagggttcatcatga                                                                     >  1:1244076‑M2/1‑71 (MQ=255)
                                                                            tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCCCCCTACTCCCGGGa                                                                    >  1:526903‑M2/67‑143 (MQ=255)
                                                                                    ggcgacatgaaatgactgtgtcagcctagaaggatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGAt                                                            <  2:451351‑M2/85‑1 (MQ=255)
                                                                                    gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGCAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGctgct                                                            >  2:360075‑M2/59‑141 (MQ=255)
                                                                                    cGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                                                            >  1:117712‑M2/1‑62 (MQ=255)
                                                                                       tAGCCCACCCCATAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta                                                         >  2:876490‑M2/1‑59 (MQ=255)
                                                                                        aaatgacatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGGTTGctgattgtt                                                        <  2:296420‑M2/89‑5 (MQ=255)
                                                                                        aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGTAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                        <  1:769538‑M2/89‑1 (MQ=255)
                                                                                        aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                        <  1:1110248‑M2/89‑1 (MQ=255)
                                                                                        aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                        >  1:1261053‑M2/55‑143 (MQ=255)
                                                                                        aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                        <  1:719378‑M2/89‑1 (MQ=255)
                                                                                          ccAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggcaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct                                                      <  1:193988‑M2/143‑88 (MQ=255)
                                                                                          atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGt                                                      <  2:122689‑M2/91‑1 (MQ=255)
                                                                                            gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGCAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGCTAAAAGTGc                                                    >  2:1185474‑M2/51‑143 (MQ=255)
                                                                                            gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGtga                                                    >  1:204343‑M2/51‑142 (MQ=255)
                                                                                            gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGc                                                    <  1:1147872‑M2/93‑1 (MQ=255)
                                                                                             aCCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacacgtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg                                                   <  2:303269‑M2/143‑91 (MQ=255)
                                                                                              ccGCAGAATCATGTATTGTGTCCGGTGCGACTGAGCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagagcatgtttgtcctctggaggcataggacagggatcatcatgagtcatcaaactaccttcgc                                                  <  2:1034589‑M2/143‑92 (MQ=255)
                                                                                               atgcctgaggcagccgtgaggaatgtccccgcttattcgcaccttccCTAAGTAAGGTGGGGAAAGCATGAGCACCCTTGTGATTTTTTTAGCTTTGTTGCTGTCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGAt                                                 <  2:95458‑M2/96‑1 (MQ=255)
                                                                                                 caggctcatgtATGGGGGCTGGTGCGAGGGGCCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcttgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                               >  2:1283486‑M2/6‑49 (MQ=255)
                                                                                                 cAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                               <  1:949673‑M2/143‑95 (MQ=255)
                                                                                                 cAGAATCAGGTGTTGTGTCCGGTGGCACCGACCACGACTGACAGTCTAAggaatgtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                               >  2:1323242‑M2/1‑49 (MQ=255)
                                                                                                  actgaggcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCa                                              <  1:853816‑M2/99‑1 (MQ=255)
                                                                                                     gagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGGTGGACTCCATACGAGTTGCCGGCTGGCTGATCAAAGTGCCATCCAGAc                                           >  2:960530‑M2/42‑143 (MQ=255)
                                                                                                      tCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgccagtg                                          <  2:547213‑M2/143‑100 (MQ=255)
                                                                                                        ccagctgagaagaatttccccgcttatgcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGc                                        <  1:1318846‑M2/105‑1 (MQ=255)
                                                                                                        aTGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                        >  1:967379‑M2/1‑42 (MQ=255)
                                                                                                        aTGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacatagcttcgacgacagggca                                        <  2:339786‑M2/143‑102 (MQ=255)
                                                                                                          agccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACAATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGt                                      >  1:857154‑M2/37‑143 (MQ=255)
                                                                                                               agaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCt                                 >  2:541277‑M2/32‑143 (MQ=255)
                                                                                                                  agaatttccccgcttattcgcaccttccCTAAGTAAGATGAGGAAAGCATGAGCACACTTGTGATTATTTTAGATGCGGTGCTGGCCAGCCCACTACTTGCGGGATGGCTGATAAAAGGGCGAGCCAGACCGcgtcaggcgaa                              >  2:655678‑M2/29‑138 (MQ=255)
                                                                                                                      tttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGGTCCAGACGGCGTCAGCTGCCCTgg                          >  1:1330067‑M2/25‑143 (MQ=255)
                                                                                                                      gTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcggcgacagtgaattccgcagtaagcg                          <  1:675506‑M2/143‑116 (MQ=255)
                                                                                                                          gACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgacccatcaactttccttcgccgacagtgaattcagcagtaagcgccgt                      <  1:114321‑M2/143‑120 (MQ=255)
                                                                                                                          cccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCa                      >  1:101342‑M2/21‑143 (MQ=255)
                                                                                                                           ccgcttattcgcaccttccCTAAGTACGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCCCTACTTGCCGGATGGCTGATAAAAGTGAAATCCAGACGACGTCAACTGCCCTGGACCaa                     >  1:1230344‑M2/20‑143 (MQ=255)
                                                                                                                           ccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGGTAACAGTGAGATCCAGTCGGAGTCACCTGCCCCGgaccca                     >  2:467767‑M2/20‑141 (MQ=255)
                                                                                                                            cTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca                    >  2:931959‑M2/1‑22 (MQ=255)
                                                                                                                             gcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGGTGCGCTGGACCAACg                   >  1:438469‑M2/18‑143 (MQ=255)
                                                                                                                              gACCAGGGCTGACAGACTAAggacggttcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga                  >  2:1341054‑M2/1‑20 (MQ=255)
                                                                                                                               ttattcgcaccttccCGAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAGTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGcc                 <  2:993883‑M2/128‑1 (MQ=255)
                                                                                                                               aCCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac                 <  2:634905‑M2/143‑125 (MQ=255)
                                                                                                                                    tgcaccttacATAAGTAAGATTGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTATTTTGCTGGCCTGCTCACTACTAGCAGGATGGCTGATAAACGTGCGATCCAGACAGCGTCAGCTGCCCTGGACCAACGCCTTcgc            <  2:164425‑M2/133‑1 (MQ=255)
                                                                                                                                     gcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgcg           >  1:509315‑M2/10‑143 (MQ=255)
                                                                                                                                      caccttccCTAAGTAAGATGGGGAAAGCATAAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCgg          >  2:628874‑M2/9‑143 (MQ=255)
                                                                                                                                         cttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGGCCAACGCCTTCGCGGATg       >  1:1175729‑M2/6‑143 (MQ=255)
                                                                                                                                          ttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCATGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGCTgc      >  2:1350190‑M2/5‑143 (MQ=255)
                                                                                                                                              cTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGTCTGCTCACTACTTTCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCGTGGACCCACGCCTTCGCGCATGAGCaa  >  2:364066/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
TGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAA  >  NC_000913/3526307‑3526591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.