Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,526,449 IS5 (+) +4 bp intergenic (‑300/‑17) nudE ← / → yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)78 (1.030) 62/284 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3526449 = 0 (0.000)intergenic (‑300/‑20) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein
* ? NC_000913 = 2290113NA (NA)82 (1.100) 58/282 0.2 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3526452 0 (0.000)intergenic (‑303/‑17) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

Only 100 of 161 total aligned reads displayed.

CGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAAA  >  NC_000913/3526315‑3526592
                                                                                                                                          |                                                                                                                                            
cGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaag                                                                                                                                         <  1:454204‑M2/143‑6 (MQ=255)
 gCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaagg                                                                                                                                        <  2:722083‑M2/143‑7 (MQ=255)
    ttCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgc                                                                                                                                     >  1:1043999‑M2/1‑134 (MQ=255)
        gagGGTTTGCTATGATCAGCGGTTACTGTGAGGTGCTTAATGATGCTTAAGTTTTCTGAATGGCGTTCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaac                                                                                                                                 >  1:994155‑M2/1‑130 (MQ=255)
        aaatggcgcagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGa                                                                                                                                  <  1:148881‑M2/16‑1 (MQ=255)
         aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTACGGAAGCTGGGGaa                                                                                                                                 >  2:803165‑M2/127‑143 (MQ=255)
             gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGgggaaattc                                                                                                                             <  2:85208‑M2/21‑4 (MQ=255)
              cgaagaagcggtctaaataggctgatgcaaggcatgtacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCAt                                                                                                                            <  2:1344453‑M2/22‑1 (MQ=255)
              cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCAt                                                                                                                            <  1:552173‑M2/22‑1 (MQ=255)
              cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCAt                                                                                                                            <  1:768459‑M2/22‑1 (MQ=255)
                gCTATCTTCAGCGGTTACTGTGATGGGCTTGATGAGGCTCAGGTTGAGCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTACGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccct                                                                                                                         >  1:293423‑M2/1‑122 (MQ=255)
                     gATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGAAAGACTAAggaaggtgcgaacaagccccgcataa                                                                                                                    <  2:461252‑M2/143‑27 (MQ=255)
                     acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCAcc                                                                                                                     <  2:920313‑M2/29‑1 (MQ=255)
                       tCCGCGGTTACTGTGATGTGCTTCATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACTGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                  >  2:1103133‑M2/1‑115 (MQ=255)
                       tCAGCGGTTACTGTGATGTGCTTAATGCTGCTCAAGTTAAACTCCACGCTTGCCGATCGCCAACCGCAGAATCCTGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGCCCAAggaaggtccggacaaggccctgctacga                                                                                                                  <  2:370226‑M2/143‑29 (MQ=255)
                       tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                  <  2:448906‑M2/143‑29 (MQ=255)
                       tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                  <  2:1001556‑M2/143‑29 (MQ=255)
                       tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                  <  1:1117337‑M2/143‑29 (MQ=255)
                        gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCAtt                                                                                                                  <  1:797247‑M2/32‑1 (MQ=255)
                         cgcGGTTAGTGTGCTGTGCTTTAGGGTGCTCAAGTTAAACTCCACGCTGGCCGCTAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTACggaaggtgcgaacaagtccctgatatgaga                                                                                                                >  2:881003‑M2/2‑113 (MQ=255)
                          tcttttacttTGATGTGCTTAATTATTCTTAATTTAAACTCCACGCTTGCCCATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagat                                                                                                               >  1:17097‑M2/5‑112 (MQ=255)
                             gtgagtgtgaggtgCTTAATGATGCTCAATTTACACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATGGTGTCCGGTGCGCCTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcat                                                                                                            >  1:341891‑M2/6‑109 (MQ=255)
                               tACTGTGATGTGGTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                          >  1:603712‑M2/1‑107 (MQ=255)
                                aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATtgtgactct                                                                                                          >  2:270102‑M2/104‑139 (MQ=255)
                                aggctgagtcaaagcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAtttt                                                                                                          <  1:1235061‑M2/40‑1 (MQ=255)
                                 cgctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAttttt                                                                                                         <  1:1205035‑M2/41‑1 (MQ=255)
                                 cTGTGATGTGTTTTATGATTCTCAATTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAAGCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                        >  1:441776‑M2/1‑105 (MQ=255)
                                  tgtgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatgatgtttg                                                                                                       <  1:970210‑M2/143‑40 (MQ=255)
                                  tgtgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                       <  1:611451‑M2/143‑40 (MQ=255)
                                  tgtgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                       <  1:1157872‑M2/143‑40 (MQ=255)
                                  tgtgATGTGCTGAAGGATGCTCAAGTTAAGCTCCACGCTTGGCGAGAGCCAACCGCAGCATCAGGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                       >  1:31645‑M2/1‑104 (MQ=255)
                                   ctgattcaaggcatttacgggagaaaaaatcggctccaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAttttttt                                                                                                       <  1:1059117‑M2/43‑1 (MQ=255)
                                    tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAGGCGTGAGCACCATGGTGATTTTTTTa                                                                                                      >  1:988328‑M2/100‑143 (MQ=255)
                                    tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTa                                                                                                      <  1:517965‑M2/44‑1 (MQ=255)
                                    tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaatccgccaagaagaatttccccgcttattagcaccttccCTAAGAAAGGTGGTGAAAGCAGAAGCACCATATGGATTTGTTTa                                                                                                      >  2:121751‑M2/100‑143 (MQ=255)
                                      aTGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat                                                                                                   <  1:1145273‑M2/143‑44 (MQ=255)
                                        gtgCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgcacacgcccctgatatgagatgatggttgggctcg                                                                                                 <  2:1170540‑M2/143‑46 (MQ=255)
                                          aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGaaa                                                                                                                                >  2:756591‑M2/94‑111 (MQ=255)
                                           aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagcatttccccgcttcttcgcaccttccCTAAGTCAGCTGGGGAACGCATGAGCACCCTTGCGCTCTTTTTagccgctc                                                                                               >  2:344472‑M2/93‑142 (MQ=255)
                                              catttacgggagaaaagagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatgtccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGc                                                                                            <  2:589935‑M2/54‑1 (MQ=255)
                                                tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTACATGCGTTGCTg                                                                                          >  2:730415‑M2/88‑143 (MQ=255)
                                                 gatgCTCAAGGTGAGGTAGACGGTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata                                                                                        >  2:1246420‑M2/1‑89 (MQ=255)
                                                    cgggagaaagaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCt                                                                                      <  2:369681‑M2/60‑1 (MQ=255)
                                                     gggagaaaaaatcggctcaaacatgaagcaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGGAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTg                                                                                     <  1:859842‑M2/61‑1 (MQ=255)
                                                     gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttgttcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGGTTTTTTTAGCTGCTTTGCTGGCCTg                                                                                     >  1:1224367‑M2/83‑143 (MQ=255)
                                                      tCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                   <  1:318902‑M2/143‑60 (MQ=255)
                                                        aaGTTTACCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                 >  1:1268318‑M2/1‑82 (MQ=255)
                                                         gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGCTTTTTTTCGCTGCTTTGCTGGCCTGCCCa                                                                                 >  2:845439‑M2/79‑143 (MQ=255)
                                                           ttAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                              <  2:131711‑M2/143‑65 (MQ=255)
                                                           ttAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTAACAGACTAAggaaggtgcgaacaagtccctgatatgagcacatgtttgtcatccggagcaatagaacagggta                                                                              <  2:491182‑M2/143‑65 (MQ=255)
                                                               gcttcgcgctgggCGGTAGCCAACTGCGGGAGCATGTATTGTGTCCGGTGCGACTGACCACGGCTGACAGACTAAggaaggtgcgagcgagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                          >  2:560140‑M2/7‑75 (MQ=255)
                                                                tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTg                                                                          <  1:46176‑M2/72‑1 (MQ=255)
                                                                   tctcaaacaggaagattttagatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCgg                                                                       <  2:1091716‑M2/75‑1 (MQ=255)
                                                                   gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcaccgcttattcgcaccttcaCTGCGTGAGAAGTGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCgg                                                                       >  2:162448‑M2/69‑143 (MQ=255)
                                                                   cACGCTTGCCGATAGCCAACCGCAGTATCATGTATTGTGTCCGGTGCGACTGACCACGCGTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                      >  2:1004292‑M2/1‑71 (MQ=255)
                                                                    cgcgggtgccgatGGCCAGCGGCTGAATCGTGTAGTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                      >  2:357792‑M2/7‑71 (MQ=255)
                                                                     tcaaacgtgaggaaatgaaatgactgagtcagccgagacgaataaccaatcgtgttcgcaccttccCTCTGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGa                                                                     <  1:929220‑M2/77‑1 (MQ=255)
                                                                            ccGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagctcatgtttgtcatctggagccatagaacaggagacagcatgagtgatcaa                                                              <  2:1160071‑M2/143‑81 (MQ=255)
                                                                            ccGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                                                              >  1:476617‑M2/1‑63 (MQ=255)
                                                                             ggcgacatgaaatgactgtgtcagcctagaaggatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGAt                                                             <  2:451351‑M2/85‑1 (MQ=255)
                                                                             gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGCAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGctgct                                                             >  2:360075‑M2/59‑141 (MQ=255)
                                                                             cGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                                                             >  1:117712‑M2/1‑62 (MQ=255)
                                                                                 aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGTAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                         <  1:769538‑M2/89‑1 (MQ=255)
                                                                                 aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                         >  1:1261053‑M2/55‑143 (MQ=255)
                                                                                 aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                         <  1:1110248‑M2/89‑1 (MQ=255)
                                                                                 aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                         <  1:719378‑M2/89‑1 (MQ=255)
                                                                                    cAACCGCAGAATCATGCATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                      <  1:641772‑M2/143‑89 (MQ=255)
                                                                                     gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGtga                                                     >  1:204343‑M2/51‑142 (MQ=255)
                                                                                     gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGc                                                     <  1:1147872‑M2/93‑1 (MQ=255)
                                                                                      aCCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacacgtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg                                                    <  2:303269‑M2/143‑91 (MQ=255)
                                                                                       aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGa                                                   <  1:417132‑M2/95‑1 (MQ=255)
                                                                                        atgcctgaggcagccgtgaggaatgtccccgcttattcgcaccttccCTAAGTAAGGTGGGGAAAGCATGAGCACCCTTGTGATTTTTTTAGCTTTGTTGCTGTCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGAt                                                  <  2:95458‑M2/96‑1 (MQ=255)
                                                                                          cAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                                <  1:949673‑M2/143‑95 (MQ=255)
                                                                                              gagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGGTGGACTCCATACGAGTTGCCGGCTGGCTGATCAAAGTGCCATCCAGAc                                            >  2:960530‑M2/42‑143 (MQ=255)
                                                                                               tCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgccagtg                                           <  2:547213‑M2/143‑100 (MQ=255)
                                                                                                 aTGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcctgaacttaccttcgccgacagtgaa                                         <  1:183136‑M2/143‑102 (MQ=255)
                                                                                                   gTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                       >  1:545569‑M2/1‑40 (MQ=255)
                                                                                                   agccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACAATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGt                                       >  1:857154‑M2/37‑143 (MQ=255)
                                                                                                    tcttgtGTCGGGTGCGCCTGACCACGCCTGACAGACTAAgtaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                      >  2:20711‑M2/3‑39 (MQ=255)
                                                                                                      cgagatgaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTCCTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAg                                    <  2:1124166‑M2/110‑1 (MQ=255)
                                                                                                        agaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCt                                  >  2:541277‑M2/32‑143 (MQ=255)
                                                                                                           agaatttccccgcttattcgcaccttccCTAAGTAAGATGAGGAAAGCATGAGCACACTTGTGATTATTTTAGATGCGGTGCTGGCCAGCCCACTACTTGCGGGATGGCTGATAAAAGGGCGAGCCAGACCGcgtcaggcgaa                               >  2:655678‑M2/29‑138 (MQ=255)
                                                                                                            ccGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                              >  1:1361734‑M2/1‑31 (MQ=255)
                                                                                                               tttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGGTCCAGACGGCGTCAGCTGCCCTgg                           >  1:1330067‑M2/25‑143 (MQ=255)
                                                                                                                tgccccgcgtatgcgcactttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTCCTTGCGCGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTTGa                          <  2:302329‑M2/120‑1 (MQ=255)
                                                                                                                   gaccgaccACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                       >  1:723721‑M2/1‑24 (MQ=255)
                                                                                                                   gACTGTCCCCGCCCTACAGACTAAggaaggtgcgaacaagcccctgattggagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtacgcgccgt                       >  2:172839‑M2/1‑24 (MQ=255)
                                                                                                                   gACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgacccatcaactttccttcgccgacagtgaattcagcagtaagcgccgt                       <  1:114321‑M2/143‑120 (MQ=255)
                                                                                                                   cccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCa                       >  1:101342‑M2/21‑143 (MQ=255)
                                                                                                                    ccgcttattcgcaccttccCTAAGTACGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCCCTACTTGCCGGATGGCTGATAAAAGTGAAATCCAGACGACGTCAACTGCCCTGGACCaa                      >  1:1230344‑M2/20‑143 (MQ=255)
                                                                                                                    ccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGGTGGCTGGTAAAAGTGCGATCCATACGGCGTCAGCTGCCCTGGACTaa                      >  1:1271857‑M2/20‑143 (MQ=255)
                                                                                                                      gcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGGTGCGCTGGACCAACg                    >  1:438469‑M2/18‑143 (MQ=255)
                                                                                                                      gcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAACCCGACTCTTCTGTCCTCGACCAACg                    >  2:1246110‑M2/18‑143 (MQ=255)
                                                                                                                       gACCAGGGCTGACAGACTAAggacggttcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga                   >  2:1341054‑M2/1‑20 (MQ=255)
                                                                                                                        ttattcgcaccttccCGAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAGTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGcc                  <  2:993883‑M2/128‑1 (MQ=255)
                                                                                                                        aCCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac                  <  2:634905‑M2/143‑125 (MQ=255)
                                                                                                                           aCGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgtagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccag               <  1:668317‑M2/143‑128 (MQ=255)
                                                                                                                             tgcaccttacATAAGTAAGATTGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTATTTTGCTGGCCTGCTCACTACTAGCAGGATGGCTGATAAACGTGCGATCCAGACAGCGTCAGCTGCCCTGGACCAACGCCTTcgc             <  2:164425‑M2/133‑1 (MQ=255)
                                                                                                                              gcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgcg            >  1:509315‑M2/10‑143 (MQ=255)
                                                                                                                                        taagtaagATGGGGAAAGCATGAGCACCATTGTGATTTTTTTATCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATACAAGTGCGCTCCGGACGCCGTCAGCTGCCCTGCACCAACGCCTTCGCGTATGCGCaaa  >  2:935906/1‑143 (MQ=255)
                                                                                                                                          |                                                                                                                                            
CGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAAA  >  NC_000913/3526315‑3526592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.