Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,876,678 IS5 (+) +4 bp coding (98‑101/1038 nt) iap → aminopeptidase in alkaline phosphatase isozyme conversion

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)32 (0.860) 31/284 0.2 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 2876678 = 0 (0.000)coding (98/1038 nt) iap aminopeptidase in alkaline phosphatase isozyme conversion
* ? NC_000913 = 2290113NA (NA)29 (0.780) 28/284 0.3 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 2876681 0 (0.000)coding (101/1038 nt) iap aminopeptidase in alkaline phosphatase isozyme conversion

TAAAAAAATTTGCATGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTA  >  NC_000913/2876548‑2876822
                                                                                                                                     |                                                                                                                                             
cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgacagagtcaaccgagaagaaattccccgcttattcgcaccttgtCTAATACGcagac                                                                                                                                      >  2:11119‑M2/131‑141 (MQ=255)
  aaaaaaTCTGCATGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcga                                                                                                                                    >  1:181939‑M2/1‑132 (MQ=255)
   aaaaaTTTGCATGGTATGTACGGGCTCACTATGTTCTCCGCAGTGTGCCGCCGTGCCCCTGCCCTGGCTCGCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaa                                                                                                                                   >  2:399917‑M2/1‑131 (MQ=255)
    agtcgcgaagaaacgatctaaaaggggttattccaggcatttactggagaaaaaatgggctcaaacatgaacaaatgaaatgactgagtcacccgagaagaatttccccgcttattcgcaccttccCTAATCCTCAGGCACGa                                                                                                                                  <  2:139947‑M2/17‑1 (MQ=255)
      aaTTTGCATGGTATTTAAGTTCTCTCTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGTGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTATACCTGGCGATTTTGCTAAggaaggtgcgaacaa                                                                                                                                >  2:330346‑M2/1‑128 (MQ=255)
       ggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcaccgcttattcgcaccttccCTAATACTCAGGCACgacgt                                                                                                                               >  2:570463‑M2/124‑141 (MQ=255)
        tttGCATGGTATTTCAGGGCTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCATCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagt                                                                                                                              >  1:639681‑M2/1‑126 (MQ=255)
        gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatatccccgattatacccaccttccCTAATACTCAGGCACGCCata                                                                                                                              >  2:137271‑M2/123‑143 (MQ=255)
         cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTCATACTCAGGCACGACatat                                                                                                                             >  1:569789‑M2/122‑143 (MQ=255)
           aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTg                                                                                                                           >  1:324771‑M2/120‑143 (MQ=255)
           aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTg                                                                                                                           <  1:407102‑M2/24‑1 (MQ=255)
              tGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGCTTTTGCTAAggaaggtgcgaacaagtacctga                                                                                                                        <  1:484841‑M2/143‑24 (MQ=255)
                   tttAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatga                                                                                                                   >  1:441394‑M2/1‑115 (MQ=255)
                   gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcgtattcgcaccttccCTAATACTCAGGCACGACATATTGCTActttc                                                                                                                   >  2:401930‑M2/112‑143 (MQ=255)
                     tAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgaga                                                                                                                 >  1:58223‑M2/1‑113 (MQ=255)
                        ggACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTACACCTGACCATTTTGCAAAagaaagtgcgaacaagaccatgatatgagatag                                                                                                              <  1:502457‑M2/143‑34 (MQ=255)
                            tCACCATGTCTGCCGCATTGCGCCACCGGACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                          >  1:273410‑M2/1‑106 (MQ=255)
                             gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttagtcgcaccttccCTCATACTCAGGCACACCATATTGCGAATTTCTGtgcggagc                                                                                                         >  2:407331‑M2/102‑140 (MQ=255)
                               tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACCTATTGCTACTTTCTTTCCGGgaccc                                                                                                       >  1:194974‑M2/100‑141 (MQ=255)
                                       ggcatttacggcagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCgg                                                                                               <  1:80426‑M2/52‑1 (MQ=255)
                                         catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGaa                                                                                             <  2:420775‑M2/54‑1 (MQ=255)
                                          atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCggacc                                                                                            >  2:443062‑M2/89‑141 (MQ=255)
                                            ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTc                                                                                          <  1:373610‑M2/57‑1 (MQ=255)
                                            aTTGCGCCACCGTACCGCTGCCCCGGCGCTCGGCGTATGCTTTATTCTCCCCGTAGGCGCCTCGTCACCTACACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat                                                                                          >  2:308053‑M2/1‑90 (MQ=255)
                                             ttGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCCGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata                                                                                         >  1:608663‑M2/1‑89 (MQ=255)
                                                gggggaaaaaatcggctgaaacatgaagaaatgaaatgactgagtcagccgagaagaattgccccgcttatgcgcacctgccCTAAGAGTCAGGCACGACATATTGCTACTTTCTTGCCGGGACGCATGATCGGAACTCCTGc                                                                                      <  2:125069‑M2/61‑1 (MQ=255)
                                                gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATCACCGGAactccgtc                                                                                      >  2:613236‑M2/83‑140 (MQ=255)
                                                  gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACGTTCTTTCCGGGACGCATGACCGGAACTCCTGCAg                                                                                    >  1:225258‑M2/81‑143 (MQ=255)
                                                   cACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag                                                                                   <  2:22597‑M2/143‑61 (MQ=255)
                                                    gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGCACTCCCGCAGaa                                                                                  >  2:173196‑M2/79‑143 (MQ=255)
                                                    gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGaa                                                                                  <  1:405493‑M2/65‑1 (MQ=255)
                                                      aagaatcggctcaaacatgaagaaatgaaatgactgcgtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAAt                                                                                <  2:455013‑M2/67‑1 (MQ=255)
                                                          ccGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                                                            >  2:590270‑M2/1‑76 (MQ=255)
                                                          ccGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCGCGTCACCTGAACCTGGCGATTTTGCTAAggaaggtgcgaaaaagtgccggatatgagatcatgtgtggcatggggagcactagaacagggttcca                                                                            <  2:184615‑M2/143‑68 (MQ=255)
                                                             ggctcaagcatgcagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCt                                                                         <  2:494150‑M2/74‑1 (MQ=255)
                                                               gCCCTGGCGCTCGGCGTATGCTATATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGAGTTTGCTAAggaaggtgcgaacaagtcccttatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                       >  1:7941‑M2/1‑71 (MQ=255)
                                                                   tGGCGCTCGGCGTATGCTTTATTCTCCCCGTCCACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                                                                   >  2:113375‑M2/1‑67 (MQ=255)
                                                                   tGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                                                                   >  1:479013‑M2/1‑67 (MQ=255)
                                                                          agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc                                                            >  1:522980‑M2/57‑143 (MQ=255)
                                                                                  gCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtgcatcatgagtcatcaacttaccttcgc                                                    <  1:546311‑M2/143‑92 (MQ=255)
                                                                                           tcCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga                                           <  2:121993‑M2/143‑101 (MQ=255)
                                                                                            tcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATACTCGCCAACAGTTTCAgcaca                                          >  2:90954‑M2/39‑141 (MQ=255)
                                                                                            ccccGTACATGCCTCGTCTCCTGAACTTGTCGATTTTGCTAAggaaggtgcgaacaagtacctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                          >  1:418517‑M2/1‑42 (MQ=255)
                                                                                             cagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAACTGTTCTCTGCCCACGATAGCCGCCCACAGCTTCAGCAAAt                                         >  2:91081‑M2/38‑143 (MQ=255)
                                                                                               gccgagaagaatgtccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATgg                                       <  1:570463‑M2/108‑1 (MQ=255)
                                                                                                ccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATggg                                      <  1:586947‑M2/109‑1 (MQ=255)
                                                                                                 tACACGCCTCGTCACCTACACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag                                     >  1:42198‑M2/1‑37 (MQ=255)
                                                                                                   cccgcCTCGTCACCTATACCTGTCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                   >  2:413452‑M2/3‑35 (MQ=255)
                                                                                                       ccTCGTCACCTAAACCTCGCGATTTTGCTAAggagggtgcgaacaagtccctgataggagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                               >  2:57029‑M2/1‑31 (MQ=255)
                                                                                                            tCACCTAAACCTGGCGATTTGGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc                          >  1:666519‑M2/1‑26 (MQ=255)
                                                                                                              aCCTGAACCTGGCGATTTTGCTAAggaaggtgcgaagaagtctctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                        >  2:55635‑M2/1‑24 (MQ=255)
                                                                                                                cgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATAtt                      <  2:324771‑M2/125‑1 (MQ=255)
                                                                                                                 gcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTc                     <  1:443062‑M2/126‑1 (MQ=255)
                                                                                                                  atgcctggCGAGTTGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatacaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga                    >  2:440768‑M2/4‑20 (MQ=255)
                                                                                                                      ttcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATAACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGatattccgcca                >  1:252459‑M2/13‑138 (MQ=255)
                                                                                                                       tGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagacatagaacagggttcatagagagctcgcaatggacgttcgccgacagtgaattcagcagtaagcgccgtcagaccaga               <  1:152578‑M2/143‑129 (MQ=255)
                                                                                                                        ggCGAGTTGGCTAAggaaggtgcgaacaggtccctgatatgagatcatgtttgtcagctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa              >  2:602711‑M2/1‑14 (MQ=255)
                                                                                                                           accttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTaa           <  2:146837‑M2/136‑1 (MQ=255)
                                                                                                                           accttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTaa           <  1:401930‑M2/136‑1 (MQ=255)
                                                                                                                              gttgCTGAgggaggtgcgaccacgtccccgcaagtagttcatgtttgtcatctggagccatagagcagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga        >  2:472552‑M2/2‑8 (MQ=255)
                                                                                                                                ccCTAATACCCAGGCACGACATAGTGCTACTTGCTTACCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTAGATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTc      <  1:101243‑M2/141‑1 (MQ=255)
                                                                                                                                   tAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTAt                                                                           <  2:535859/71‑1 (MQ=255)
                                                                                                                                   tAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTAt                                                                           >  1:535859/1‑71 (MQ=255)
                                                                                                                                    aaTACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGCta  >  1:544277/1‑143 (MQ=255)
                                                                                                                                     |                                                                                                                                             
TAAAAAAATTTGCATGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTA  >  NC_000913/2876548‑2876822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.