New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4587994 (0.060)94 (1.350) 74/276 0.0 96.0% intergenic (+99/‑89) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 = 609347 NA (NA)intergenic (+170/+112) insL1/entD IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex

Only 100 of 108 total aligned reads displayed.

CTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/458656‑458799
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGAT  <  NC_000913/609347‑609206
                                                                                                                                                                                                                                                                                               
CTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTGGTTAACCAAAAAGGGGGGAGTTTGTGTCCCCTTTAGTTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAGACATCC                                                                                                                                                 >  2:782453/1‑143
 TGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCC                                                                                                                                                >  2:996928/1‑143
 TGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCC                                                                                                                                                >  2:511686/1‑143
 TGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGAATGTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCC                                                                                                                                                >  2:1046167/1‑143
 TGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCAAACTGTTAGGTTACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCC                                                                                                                                                >  2:471174/1‑143
   ATTTATGGCACGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCAT                                                                                                                                              <  2:325752/143‑1
   ATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCAT                                                                                                                                              >  2:189540/1‑143
        TGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCG                                                                                                                                         >  1:290613/1‑143
           CAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGCGTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTA                                                                                                                                      >  2:615608/1‑143
           CAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTc                                                                                                                                      >  2:1142899/1‑142
            AAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTGGTTAACAACAAAGGGGGGGTTTTATCTCCCCTTTAATTTTTCCTCTATCCTCGGCGTTAAAGGTGGGGGGAACCATCCCATAAGCGCaa                                                                                                                                      >  2:404368/1‑141
             AGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGTGGGAAACATCCCATACGCGCTAAC                                                                                                                                    >  1:188935/1‑143
              GCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAACTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACT                                                                                                                                   <  2:1155845/143‑1
                   atGCGCAACAGGCATCTGGCGAATAATGAACCCGTCTCACACAATTAGTTACCCAAAAAGGGGGGATGGTATCTGCCCTTTAATTTTTCCTCTAATCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGG                                                                                                                              <  1:902495/141‑1
                   AAGCGCAAGAGGGATCTGGGGAATAAGGAATCATTCGCATACAATTAGTTAAGCAAAAAGGGGGGATTTTATCTGCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGG                                                                                                                              <  1:975038/143‑1
                   AAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGGTTTTCTCTCCCCTTTCATTTCTCCTCTGAACTCGTCTTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGG                                                                                                                              <  2:1246661/143‑1
                   AAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGG                                                                                                                              <  2:1093997/143‑1
                   AAGAGCAACAGGCATTTGGTGAATAATTAACCCTTCTCATACAATTTGTTAACCAAAAAGGGGGGATGGTATCTGGCGTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGG                                                                                                                              <  1:666550/143‑1
                      CGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTT                                                                                                                           >  1:1031426/1‑143
                        CAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCCCTAACTTACGGGatcc                                                                                                                         >  2:275377/1‑139
                              gcgTCTGGTCAATAAGTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATC                                                                                                                   <  1:1189677/140‑1
                              GCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTATCCAAAAAGGGGGGATTTTAGCTCCCCTTTAATTTTTCCTCTAGTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATC                                                                                                                   <  2:1212178/143‑1
                                       GAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATG                                                                                                          >  2:335212/1‑143
                                         ATAATTCTCCATTCCCATACACGTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTCCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACATCTGAAGAATGCGA                                                                                                       <  1:511686/143‑1
                                             gtgACCATTTGCATATAATTAGTTAACCCAAACGGGGGGATTTTATCGCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGAGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGC                                                                                                    <  1:110809/140‑1
                                             TTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTACCTTACGGGTTGAACCATCTGAAGCATGCGACGC                                                                                                    >  1:745081/1‑143
                                             TTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGC                                                                                                    >  1:961916/1‑143
                                             TTAACCATTCCCATACAAGTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTATCGGCGTTGAATGTGGGGTCAACATCCCATAAGCGCTAACTTAAGGGTTGGACCATCTGTAGACTGCGACGC                                                                                                    >  1:506138/1‑143
                                                ACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGCTTGAACCATCTGACGAATTCGACGCCTC                                                                                                 >  2:625476/1‑143
                                                  CATTCCCATACAATTAGCTTATCCTAAATGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGG                                                                                               <  1:489671/143‑1
                                                   ATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT                                                                                              <  2:907223/143‑1
                                                     TCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCTTTAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCGTCGGcac                                                                                            >  1:54081/1‑140
                                                      CCCATCCAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCC                                                                                           <  2:1023132/143‑1
                                                       CCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCTATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCT                                                                                          >  2:893175/1‑143
                                                       CCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCT                                                                                          >  2:899179/1‑143
                                                       CCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATACCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCT                                                                                          >  1:1132173/1‑143
                                                        CATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGTGGAACCATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAACAATGCGACGCCTCGGTGCCTC                                                                                         >  1:876424/1‑143
                                                         ATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCG                                                                                        >  1:367135/1‑143
                                                           ACAATTAGTTAACCAAAAAGGGGGGATTCTATCTCCCCTTTAATTGTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTT                                                                                      <  1:26275/143‑1
                                                             AATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGCAACTTCCCCTAAGCGCTAACTTAAGGATTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAA                                                                                    >  2:27978/1‑143
                                                             AATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAA                                                                                    >  2:739919/1‑143
                                                               tgatTTACCCAGAAGGGGGGGATTTTATCTCCCCTTGAATTTTTCCTCTATTCTCGGCGTCGAATGTGGGGGAAACAGCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA                                                                                  <  1:423893/139‑1
                                                               TTAGTTATCGAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTTCTCCATTCTCGGCGTTTAATGTGGGGGAAACATCCCATAAGCGCTAACTTACGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGA                                                                                  <  1:345712/143‑1
                                                                  GTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGA                                                                               <  2:830212/143‑1
                                                                      ACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGGTACGACGATGac                                                                           >  1:704781/1‑141
                                                                          aacacGGGGGATTTTCTCTCCCCTTTAATTTTTCCTCTATTCCCGGCGTTGAATGTGGGGGCAACATCCCATACGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGC                                                                       <  2:545943/138‑1
                                                                             gGGGGGGGTTTTATCTCGCCGTTAATTTTCACTCTCTTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTGACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTT                                                                    <  1:368601/142‑1
                                                                              GGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTC                                                                   >  1:238360/1‑143
                                                                               GGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGCTGCCTCGGTAAGACGATGCCTCGCGTGCT                                                                  >  1:65704/1‑143
                                                                               GGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCCCCGCCTCGTTGCCTCGTTAAGACGATCCCTCGCGTTCT                                                                  >  2:225485/1‑143
                                                                                      TTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTG                                                           <  2:1031426/143‑1
                                                                                      TTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATAACTAGCGTagttaaactg                                                           >  1:363452/1‑133
                                                                                        tacCTCCCCTTTCATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCG                                                         <  2:77909/140‑1
                                                                                        TATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCG                                                         <  2:715455/143‑1
                                                                                              CCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGAACCGCCTCAGTGCCTCGTTAAGACGATGCCTCGCGCTCTTCCATTGCGTTTTGT                                                   >  1:262304/1‑143
                                                                                               CCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTA                                                  <  1:335212/143‑1
                                                                                               CCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCACGGTGCCTCGATAAGACGATGCCTCGCGATCTTCAATTGCGctgagta                                                  >  1:779225/1‑136
                                                                                                CTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAAACATCTGAAGAATGCGACGCCTCGATACCTCGTTAAGACGATGCCTCGCGATCTTCAATAGCGATTTGTAG                                                 >  2:876275/1‑143
                                                                                                 TTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGG                                                >  2:155242/1‑143
                                                                                                   TAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCT                                              >  2:1060771/1‑143
                                                                                                      tcttcCCTGTATTCTCGGCGCTGAACGTGGGGCAAACCTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCCACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTC                                           <  2:3183/138‑1
                                                                                                      TTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCCATTGCGTTTTGTAGGCTGTC                                           >  1:507622/1‑143
                                                                                                       gtgTCCTCTATGCTCGGCGTTGAACGGGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGGTGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCA                                          <  1:689564/140‑1
                                                                                                       TTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTCCGTTTTaaagacaggca                                          >  2:1105865/1‑132
                                                                                                        TTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGTTGATTTTATTTTTAAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAG                                         <  2:911958/143‑1
                                                                                                          TCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGG                                       >  2:151142/1‑143
                                                                                                          TCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGG                                       <  2:1211692/143‑1
                                                                                                            CTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGGCGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGC                                               <  2:256091/133‑1
                                                                                                            CTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGGCGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGC                                               >  1:256091/1‑133
                                                                                                             tcgATTCGCGGCGTTGTGTGTGGGGGAAACACCCCATGAGCGCTAACTTAAGGGTTGAACCATCTGGAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCGCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATA                                    <  1:1196775/140‑1
                                                                                                             TCTCTTCTCGGCGTTGAATGTGGTGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATA                                    <  2:184928/143‑1
                                                                                                             TCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGACGAATGCGACGCCTCCGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGGTTTGTGGGCTGTCAGGGAga                                    >  2:814142/1‑141
                                                                                                             TCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCATCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATA                                    >  2:710117/1‑143
                                                                                                              CTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTCACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCGTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTGAGGGATAC                                   >  2:740430/1‑143
                                                                                                               TATTCTCGGCGTTGAATGTGGGGGCAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCCATCGCGTTTTGCCGGCTCTCAGGGACACT                                  >  1:326741/1‑143
                                                                                                                 TTCTCGGCGTGGAAGGTGGTGGAAACATCCCATAGGCGCTAACTGAAGGGGTGAACCATCTGAAGCATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGT                                <  1:722314/143‑1
                                                                                                                    TCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCC                             >  2:549571/1‑143
                                                                                                                     CGGCCTTGAATGTGGGGGAAACCTCCCATAAGCCCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCA                            <  1:570065/143‑1
                                                                                                                      GGCGTTGAAGGTGGGGGAATCGTCCCATGAGCGCTAGCTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCAC                           <  1:1169654/143‑1
                                                                                                                       GCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGCTTTGTAGGCTGTCAGGGATACTGTCCCACG                          >  1:956626/1‑143
                                                                                                                        CGTTGAATGTGGGGGAAACATCCCATTAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTGAATTGCGTTTTGTAGGCTGTCAGAGATACTGTCCCACGA                         >  1:1192006/1‑143
                                                                                                                        CGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGA                         <  2:290613/143‑1
                                                                                                                          TTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGGTACTGTCCCACGAAT                       >  2:616702/1‑143
                                                                                                                           TGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAGTGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCGGTCAGGGATACTGTCCCACGAATG                      <  1:102608/143‑1
                                                                                                                             AATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGC                    <  2:1002350/143‑1
                                                                                                                                   GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCT               >  1:1036232/1‑143
                                                                                                                                    GGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGAGTTTTGTAGGCTGTCAGGGATACTGTACCACGAATGGCCACCTG              >  2:1040469/1‑143
                                                                                                                                    GGGGAAACATACCATAAGCGCTAACTTAAGGGTTGAACCAACTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATACCTCGAGTTCTTCAATTGCGTTTGCTAGGCTGTAAGGTATACGTTCCCACGCATGTCCCCCTG              >  1:527573/1‑143
                                                                                                                                     cGGAAACCTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGT             <  1:508524/142‑1
                                                                                                                                      GGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGCTCTTCAATTGCGTTTTGTAGGCCGTCCGGGATCCTGTCCCACGCATGGCCACCTGaa            >  1:475613/1‑141
                                                                                                                                       gcgcggTCCCATAAGCGCTAGCTTAAGGGTCGAACCATCTGAAGCACGCGCCGCCGCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAA           <  1:581563/137‑1
                                                                                                                                       GAAACATCCCATAAGCGCTAACTTAAGGGTGGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAA           <  1:821214/143‑1
                                                                                                                                        cgACATCACATAAGCGCCGACTTATGGGTCGAACGATCTGAAGAGTGCTACGCCTCGGTGCCTCGTTAAGACGATGCCGCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAG          <  1:1146994/141‑1
                                                                                                                                         AACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGC         >  2:474751/1‑143
                                                                                                                                             gCCCATAAGCGCTATCTTAAGGGTGGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTCAAGACGATGCCTCGCGTTCGTCCATTGCGTTTTGTAGGCTGTCAGGGATACTGGCCCACGAATGGCCACCTGTAAGCTCCA     <  1:622091/142‑1
                                                                                                                                             TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCA     >  2:91404/1‑143
                                                                                                                                              CCCATACGCCCTAACTTAAGGGTTGAACCATCTGCAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAG    <  1:976798/143‑1
                                                                                                                                              CCCATAAGCGCTGACTGAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAG    <  1:1197804/143‑1
                                                                                                                                               CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCGCGCGTTCATCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCGCACGAATGGCCACCGGTAGGCTCCAG  >  1:17151/1‑142
                                                                                                                                                CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGAT  >  2:959810/1‑143
                                                                                                                                                                                                                                                                                               
CTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/458656‑458799
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGAT  <  NC_000913/609347‑609206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.