New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 458787 =3 (0.040)49 (0.730) 36/278 1.0 94.3% intergenic (+87/‑101) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 608011 = NA (NA)intergenic (+23/‑54) hokE/insL1 toxic polypeptide, small/IS186 transposase

TTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAAT  >  NC_000913/607877‑608145
                                                                                                                                      |                                                                                                                                      
tttAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGGAGGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGACGTAGACGCTGTGCGGGGAGTCATGCCATACACGCt                                                                                                                                >  2:74866/1‑143 (MQ=255)
tttAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCt                                                                                                                                >  1:1050166/1‑143 (MQ=255)
      ggTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa                                                                                                                          <  1:1158955/143‑1 (MQ=255)
        tGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAg                                                                                                                        <  1:1021158/143‑1 (MQ=255)
          cTGGGGTTTACGCGTCGGGCTGGAGACTCGCTGTGTGAGTTTTCGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAggg                                                                                                                      <  2:311601/143‑1 (MQ=255)
              gATTTACGATTCTGGTCGGAGACTCGCTGTGTGAGATTACGGTGAAGAAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtgt                                                                                                                  <  1:96274/143‑1 (MQ=255)
               acttACGCTCCTGGTCGGAGACTCGCTTGGTGAGTTTCCGGGGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTATGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg                                                                                                                 <  1:159310/141‑1 (MQ=39)
                tctACGCGTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg                                                                                                                <  1:314131/141‑1 (MQ=255)
                   aCGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGtgt                                                                                                             >  1:736857/1‑141 (MQ=255)
                     gCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa                                                                                                           >  1:681701/1‑143 (MQ=255)
                      cTTGTGGTCGGAGACTGTGTGTGGGACTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCGTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc                                                                                                          <  2:545258/143‑1 (MQ=38)
                        tCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc                                                                                                        >  1:488748/1‑143 (MQ=255)
                               ggAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGGGTGATCGCGTGCGCTCTAACTTAAGGGTTGTGGAAAAAAACCTGatat                                                                                                 >  1:76356/1‑143 (MQ=255)
                                gagaCTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTATGCCTGAtgtg                                                                                                >  2:953950/1‑143 (MQ=255)
                                     tCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa                                                                                           >  1:154749/1‑143 (MQ=255)
                                        cTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGGATTACGCCTGATATGATTTAACg                                                                                        >  2:1067178/1‑143 (MQ=255)
                                          gtgtgAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCAGGGAGTAATCCCATCAGCGCTAACTTACGGGTTGTGGTATTACGCCTGATATGATTTAACGTg                                                                                      >  2:1142923/1‑143 (MQ=255)
                                           tgtgATTTTGCGGTGAAGGAACGGAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc                                                                                     <  2:273185/143‑1 (MQ=255)
                                                 tttACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGa                                                                               >  1:94342/1‑143 (MQ=255)
                                                   tACGCTGAACGAACGTAATATTCAGTTCAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAt                                                                             <  1:1047079/143‑1 (MQ=255)
                                                     cGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTa                                                                           <  1:209832/143‑1 (MQ=255)
                                                      ggTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTAGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGGATTACGCGTGCTAGGACTTAACGTCCCACTGAATTat                                                                          >  1:774090/1‑142 (MQ=37)
                                                         ggaGGAACGTAGTATGGAGTGTAGGGCTGGTGTCGCTTACGAACCGAAGAAGTAGCCGTTGGGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCATGACGTGATTTAGTGTGCCGATGAATTActct                                                                       <  2:729264/141‑1 (MQ=21)
                                                         gAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTACATCGCGAGCGTGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTActat                                                                       >  1:223896/1‑141 (MQ=21)
                                                             gAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACg                                                                   >  1:313793/1‑143 (MQ=255)
                                                               aCGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGAt                                                                 >  1:621781/1‑143 (MQ=255)
                                                                 gTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTTTTACGCCTGATGTGATTTAACGTGCCGATGAATTACTCTCACGATaa                                                               >  1:67959/1‑143 (MQ=255)
                                                                  tAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAc                                                              <  2:449095/143‑1 (MQ=255)
                                                                  caaTATTGAGTGTGAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAc                                                              <  2:71126/142‑1 (MQ=255)
                                                                   aaTAGTGAGTTTAAGGCTGTTCTCGCTTACGAAACGAAGAAGTAGCCGTAGTGCGGGGAGTAATCCCATCAGAGCCAACTTAAGGGTTGTGGTATTACGCATCAAACAATCTAACGGGCCGAGAAAGTACTCGCACGATAACt                                                             >  2:311431/1‑143 (MQ=21)
                                                                    acatTGAGTGTAAGGCTGTGCCCGCTCACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATACGCGCGAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTg                                                            <  1:398397/141‑1 (MQ=21)
                                                                      ctggggtgtgggggtgtgCTGGCGTAGGAAACGAAGAAGTAGCGGTGGTGCGGGGAGTAATCCCATAAGCGCTAAGTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACTATAACTGGt                                                          <  2:947310/129‑1 (MQ=17)
                                                                      atTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGt                                                          >  1:903155/1‑143 (MQ=255)
                                                                      atTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCCCGCTAACCggc                                                          >  2:829681/1‑142 (MQ=255)
                                                                       ttGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATCAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGta                                                         >  1:944418/1‑142 (MQ=255)
                                                                       ttGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTc                                                         >  1:890491/1‑143 (MQ=255)
                                                                         gAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg                                                       >  1:834290/1‑143 (MQ=255)
                                                                            tttAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCaa                                                    >  1:650677/1‑143 (MQ=255)
                                                                                 ggCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg                                               >  1:945209/1‑143 (MQ=255)
                                                                                 ggCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg                                               <  1:914738/143‑1 (MQ=255)
                                                                                  gCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCCCGTTAACTGGTCAGCAAATccag                                              >  1:440685/1‑140 (MQ=255)
                                                                                   cTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGc                                             <  2:94342/143‑1 (MQ=255)
                                                                                           gcgtACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAGTGAGGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTg                                     <  2:522722/140‑1 (MQ=255)
                                                                                           gCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTg                                     <  1:180733/143‑1 (MQ=255)
                                                                                             ttACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCTATCTTGGt                                   >  1:1192738/1‑143 (MQ=255)
                                                                                             ttACGAACCGAAGAAGTAGCCGTGGTGCGGGGAGTAACCCCATAAGCGCTAACTTAAGGGTTGTGGGATTGCGCCGGATAGGATTTAACGTGCCGATGAAGTACTCTCACGATACATGGGCGGAAAATCTGGCCGATAATggc                                   >  2:392639/1‑142 (MQ=17)
                                                                                             ttACGAACCGAAGAAGCAGCCGCTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGCACGTGGTATTACACCTGCTATCATTTAACGTGCCGACGAACTACCGTCACGCTAACTCGTCAGCAAATCTGTCCCatgccggt                                   >  2:387958/1‑137 (MQ=17)
                                                                                               accaaCCGGAGAAGTGGGCGTTGTGCGGGGAGTAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTaa                                 <  2:332770/140‑1 (MQ=14)
                                                                                                  aaCCGAAGGAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATAGGATTACGCGTGCTTATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGcc                              <  2:1168381/143‑1 (MQ=17)
                                                                                                     cGAAGAAGTAGCCGTGGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCga                           <  2:263030/143‑1 (MQ=255)
                                                                                                          aagTAGCCGTGGTGCGGGGAGTAATCCCATCAGCGCTAACGTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAAc                      <  2:352679/143‑1 (MQ=255)
                                                                                                            ttAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCTATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTg                    <  2:508720/142‑1 (MQ=255)
                                                                                                            gTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGTTGTGTTTGATGCACAAAAAATGGTAACCAATTCTGGCCCATATTGGTAAGCCCAAAGAACTg                    >  1:550663/1‑143 (MQ=17)
                                                                                                            gTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACATGCCGATGAATTACTCTCACGAGAACTGGTCAGCAATTCTGGCCCAGCTTGGTAAGCCCGAAGGACTg                    >  1:610572/1‑143 (MQ=14)
                                                                                                            gTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTg                    <  1:319365/143‑1 (MQ=255)
                                                                                                               gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGAt                 >  1:1168680/1‑143 (MQ=255)
                                                                                                                ctgtggtgCGGAGTTTAACCCGATAAGCGCTATCTTAAGCGTTGTGGTATTACTCCTGATATGATTTAACGCGCCGTTGCACACCTCTCACGATAACTAGTCAGCAATTCTGGCCCATATTGGTAACCCCGAAGAACTGGATa                <  2:77237/138‑1 (MQ=11)
                                                                                                                ccGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATCGGTACGCCCGAAGAACTGGATa                >  1:1107490/1‑143 (MQ=255)
                                                                                                                 cGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGCTTTAACGTGCCGATGAATTACTCTCACGATAACTGGCCAGCAATTCTGGCCCATATTGGTAAGCCCGAATAACCGGCTAc               >  2:828196/1‑143 (MQ=14)
                                                                                                                 cGTAGTGCGGGGAGGAATCCCATAAGCGCTAACTTAAGGGTTGTGGCATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATAc               <  1:648093/143‑1 (MQ=255)
                                                                                                                    tgtgCGGGGAGTAATCCCGTAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTc            <  1:856550/143‑1 (MQ=255)
                                                                                                                          gggAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGCAGAACTGGATACTTCGGCACg      >  1:307194/1‑143 (MQ=25)
                                                                                                                              gTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTCAGCCCGAAGAACTGGATACTTCGGCACGTAAt  <  2:1050166/143‑1 (MQ=17)
                                                                                                                                      |                                                                                                                                      
TTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAAT  >  NC_000913/607877‑608145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.