New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12078058 (0.120)41 (0.700) 33/252 0.9 85.3% coding (305/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 = 1209602 7 (0.120)pseudogene (18/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

Only 100 of 104 total aligned reads displayed.

GTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207664‑1207947
                                                                                                                                             |                                                                                                                                              
attacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttaataaaagTTGGATTGGGAGAAGGa                                                                                                                                               <  2:644963‑M1/17‑1 (MQ=255)
 ttacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgGTGGTTTGGGAGAAGGAg                                                                                                                                              <  1:891694‑M1/18‑1 (MQ=255)
  tacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGc                                                                                                                                             >  2:161891‑M1/125‑143 (MQ=255)
     gttgtagatctgggttctggtcatttgttgatacgcgtacatagccaatacgcatgttatatccacctggtaaaagcaggaatgatgccattttcttgttatttctatattttcataaacgTTGGTTTGGGAGAAGGAGCaaa                                                                                                                                          >  2:1068770‑M1/122‑143 (MQ=255)
      gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGAGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATCTCAAATCGGATGGCACTGTGCACACGGCTCTCGAAGACCGTGGTCGGGGAGAAGGctctgca                                                                                                                                         >  1:233267‑M1/1‑136 (MQ=255)
        gtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACt                                                                                                                                       >  1:823378‑M1/119‑143 (MQ=255)
        gtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcgtgttatttcttcattttcatcaaagGTGGTTTGGGAGGGGGAGCAAAACt                                                                                                                                       <  1:625384‑M1/25‑1 (MQ=255)
        gtagatctgtgttctgggcatttgttgatacgcgtacatagccaataagcatgtgagagccccccggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACt                                                                                                                                       >  1:839514‑M1/119‑143 (MQ=255)
         tGGAGAAGGGGCGGCACGACCAGTTACATACCGCACTTAGCGCGCTGCTGTTAAGCCGCAAGCATCCGTTTGGCGATATCAACTCGGATGCCACTGTGCAAACGGCTCTCGAAAAACTTGGTATGGCAGAAggcagcgcagtc                                                                                                                                      >  2:1008861/1‑133 (MQ=17)
            atctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                   <  2:878033‑M1/29‑1 (MQ=255)
            atctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                   <  1:471235‑M1/29‑1 (MQ=255)
            atctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                   <  1:334660‑M1/29‑1 (MQ=255)
            aggagggGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacct                                                                                                                                   >  1:847288‑M1/4‑130 (MQ=255)
               tgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                <  2:114932‑M1/32‑1 (MQ=255)
               aGGGCCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTGAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                                                                                <  2:157333‑M1/143‑17 (MQ=255)
                ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                               <  2:45201‑M1/143‑18 (MQ=255)
                ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCCCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                               <  1:671253‑M1/143‑18 (MQ=255)
                   ttctggtcatttgttgatacgcgtacatagccaatcagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                            <  2:168585‑M1/36‑1 (MQ=255)
                   ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                            <  2:299775‑M1/36‑1 (MQ=255)
                      gcAGGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcc                                                                                                                         <  1:377231‑M1/143‑24 (MQ=255)
                      gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                         >  2:394574/1‑143 (MQ=255)
                            ccAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                                                                                   >  1:506679‑M1/1‑114 (MQ=255)
                             cAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGATTGGGAGAAGGctctgcagtacctgttggtgtcccggtgcc                                                                                                                  >  2:784544‑M1/1‑113 (MQ=255)
                                ttatttacCGCACTTCGCGCGCTGCTGTTACGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                               <  2:556665‑M1/143‑34 (MQ=255)
                                 tgagacgcgtacatatccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                                              >  1:470113‑M1/94‑143 (MQ=255)
                                   cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgaattaactgatggtatcacggttccgtagcc                                                                                                            >  2:202649‑M1/1‑107 (MQ=255)
                                   atacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGATAAGGAGCAAAACTCAATGCAGCAACCGTTACGttagggag                                                                                                            <  2:734138‑M1/52‑4 (MQ=255)
                                   atacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                                                                            >  1:85036‑M1/92‑143 (MQ=255)
                                    ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcct                                                                                                           >  1:9094‑M1/1‑106 (MQ=255)
                                      cgcgtacacggctaataagcattttaaatccccctggtcaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                                                                         >  2:717625‑M1/89‑143 (MQ=255)
                                       ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGCTATCAAATCGGATGGCACTGTGCAAACGGCTCTCGCAAACCTTGGTTTGGGAGACGGctctgcattccctgttggtgtcccggttccgtggccttca                                                                                                        >  1:332981‑M1/1‑103 (MQ=255)
                                         gcgctgcccgcgctgctgttcATCCGCAAGAATCCGGCTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                                      <  2:30940‑M1/135‑43 (MQ=255)
                                         gccgtgcgcgcgctgctgTTACACCGCAAGGCGCCGTTTTGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTCGTGTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                                      <  2:969432‑M1/137‑43 (MQ=255)
                                          tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt                                                                                                     >  2:471235‑M1/85‑143 (MQ=255)
                                           aCTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcca                                                                                                    <  2:540356‑M1/143‑45 (MQ=255)
                                            catagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                                   >  1:462503‑M1/83‑143 (MQ=255)
                                             ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccact                                                                                                  >  1:181496‑M1/1‑97 (MQ=255)
                                             atagccaataagcatgttaaatccccctgggaaaggtaggaatgttgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                  >  2:282870‑M1/82‑143 (MQ=255)
                                                gccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGCGCAAAACTCAATGCAGCAACTGCTACATTAGGACGCACCGGTTTCATa                                                                                               <  1:591511‑M1/65‑1 (MQ=255)
                                                gccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                               >  2:765483‑M1/79‑143 (MQ=255)
                                                   cgcTGCTGTTGAGCCGCTGGCATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTGTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcca                                                                                            <  2:1053494‑M1/143‑53 (MQ=255)
                                                         catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGAAGCCGGGGCAACATTAGGACGCACCGGTTTCATGGCTATACCg                                                                                      <  2:505921‑M1/74‑1 (MQ=255)
                                                          atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                                     >  2:718060‑M1/69‑143 (MQ=255)
                                                           ttAAGCCGTCAGTAGCTGTTTGTCGATATCAGAGCGGAGGGCACTGTGCAAACGGCTCTCGAGAGCCTTGGTGTGGGAGAAGGctctgcattacctgttggtgtctcggttccgtggccttcagccactccgccaacaggctg                                                                                    <  2:371295‑M1/143‑61 (MQ=255)
                                                           ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctg                                                                                    >  1:173386‑M1/1‑83 (MQ=255)
                                                             ttaactcccctgtgtcaatgcatgaatgatgccagttgcttgttatttctccattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                                  >  2:527606‑M1/66‑143 (MQ=255)
                                                              taaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAt                                                                                 >  1:656584‑M1/65‑143 (MQ=255)
                                                                ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctga                                                                               >  1:971012‑M1/1‑78 (MQ=255)
                                                                  gaaaGAATCTGTTTTGTTATTTCATATCGTATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                                             <  1:704934/141‑1 (MQ=38)
                                                                   ccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                            >  1:316006‑M1/60‑143 (MQ=255)
                                                                     ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                          >  1:979291‑M1/58‑143 (MQ=255)
                                                                      cgtggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacaTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCCACGGCTACATTAGGACGCACGGGTTTCATAGCTATACCACTtatgatgagtg                                                                         <  2:207968‑M1/87‑6 (MQ=255)
                                                                      ccttgtaaaaccaggaatgatcccatttgcttgttatttcctcatttccacaaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                         >  1:960985‑M1/57‑143 (MQ=255)
                                                                       aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaa                                                                        <  1:917524‑M1/143‑73 (MQ=255)
                                                                          ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgg                                                                     <  1:773436‑M1/143‑76 (MQ=255)
                                                                               tGGCGATATCAAATCGGATGGCACTGCGCAAACGGCGCTAGAAAACCTTGGTTTGCGAGAAGGAGCGCACCTCAAGGAAGCACCGGCCACACTAGTACGCACCAGATGAATAGCTATAACGCATCTCATAggtggtggcgcgt                                                                >  2:500168/1‑136 (MQ=255)
                                                                               agcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTattgcgc                                                                <  1:496819‑M1/96‑4 (MQ=255)
                                                                                ggCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgc                                                               <  2:559975‑M1/143‑82 (MQ=255)
                                                                                  cGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                            <  2:321132‑M1/64‑5 (MQ=255)
                                                                                  cGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                            >  1:321132‑M1/1‑60 (MQ=255)
                                                                                    atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAACCCTTCGTTTGGGAGAAGGctctgcattacctgctggtgtcccggctccgtggccttcagccaccccgcccacaggctgactgaaatgccacggtgcaccatgt                                                           >  2:782101‑M1/1‑58 (MQ=255)
                                                                                     aatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTGGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAATGGTGGTAGTGAGCAATCAg                                                          <  2:54753‑M1/102‑1 (MQ=255)
                                                                                       tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTGATGATTGGTGGAGTTGAGCAATCAGTa                                                        >  2:592290/1‑143 (MQ=255)
                                                                                        gatggcatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                                       >  2:842037‑M1/39‑143 (MQ=255)
                                                                                          tgccatttgcttgttatttcttcattttcataaacgTTGGTTGGGGAGCGGGGGCTGAACCCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc                                                     >  1:839449‑M1/37‑143 (MQ=255)
                                                                                          aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttcttctgct                                                     >  2:1149019‑M1/1‑52 (MQ=255)
                                                                                             catttgcttgttatttcttcatgttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                                  >  1:1108369‑M1/34‑143 (MQ=255)
                                                                                                 tGGCACTGTGCAAACGGCGCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatgacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgaaatgcaatggtgccgctttttctgctgaagaat                                              <  1:1109736‑M1/143‑99 (MQ=255)
                                                                                                   gCACTGTGCAAACGGCTCTCGAACACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatac                                            <  1:721438‑M1/143‑101 (MQ=255)
                                                                                                   cttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATAAGCTCGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                            >  1:432741‑M1/28‑143 (MQ=255)
                                                                                                    ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                                           <  1:231835‑M1/117‑1 (MQ=255)
                                                                                                    cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacc                                           >  1:853124‑M1/1‑42 (MQ=255)
                                                                                                     aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccacttcggcatttgtccttctgaaatgcaatggtgccgctttttctgctgaagaataccc                                          >  1:484762‑M1/1‑41 (MQ=255)
                                                                                                         tgCAAACGGCTTTAGAATTATCTGCTTTGCGAGAAGGTGCAAAACTTAATGCAGAAACGTTTACATTAGGACGCACCGTTTTCATAGCTTTATCGATTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                                      <  2:1053356/143‑1 (MQ=255)
                                                                                                         tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                                      <  1:1077867/143‑1 (MQ=255)
                                                                                                          gctatcggctcTCGAAAACCTTGCTTTGGTAGAAGGctctgcattacctgttggtgtcccggttccgtggcctgcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaac                                     <  2:587449‑M1/138‑108 (MQ=255)
                                                                                                           ttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                                    <  2:509134‑M1/124‑1 (MQ=255)
                                                                                                           ttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTGCATAGCTAAAACGGTTCTGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                                    <  2:510262‑M1/124‑1 (MQ=255)
                                                                                                            aaaGGGCTCTCGAAACCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                   <  1:235905‑M1/143‑110 (MQ=255)
                                                                                                            aaaCGGCTCTAGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtgggtgtcccggtgccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                   <  1:36564‑M1/143‑110 (MQ=255)
                                                                                                              ttcattttcgtacacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAGGATTGGTGGTATTGAGCAATCAGTACTCATTCAGTGGGGGTGGAATGc                                 >  2:197959‑M1/17‑143 (MQ=255)
                                                                                                              aCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAGTCAGTGGGGGTGGAATGc                                 >  2:278595/1‑143 (MQ=255)
                                                                                                               tcattttcataaacgATGGATGGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGAGGGGGAatggc                                <  2:85685‑M1/128‑3 (MQ=255)
                                                                                                                 gCTCTCGAAAACCTTGGTGTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa                              <  2:707893‑M1/143‑115 (MQ=255)
                                                                                                                   tctcGAAAACCGTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggccgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg                            <  2:847288‑M1/143‑117 (MQ=255)
                                                                                                                    ctcGAAAACCTTGGTTTCGGAGAAGGctctgcattacctgttggtgtcccggttccggggccttcagccacgccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggc                           <  1:169946‑M1/143‑118 (MQ=255)
                                                                                                                      cataaaCGTTGGTTTCGGTGGAGCAGCAAATCGCAACGCGGCAACGGCTTCCTTAGGACGCACCGGTTTCATAGCTATTCCGGTTATGAGTGGTGGTATTGAGCAATCAGTAATCATGCAGTGGGGGTGGAATGCCGCAAAAg                         <  2:867179/140‑1 (MQ=255)
                                                                                                                      cGAAAACCGTGGTTGGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggctt                         <  2:794497‑M1/143‑120 (MQ=255)
                                                                                                                         aagcctttGTTTGTCAGAGGTctctgcattacctctcggtgtcccgggtccgtggccttcagccactccgccaacaggctggttgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc                      <  2:556763‑M1/140‑123 (MQ=255)
                                                                                                                         aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGATTCACAGCTATACCGGCTATGAGTGGTGGTATTGAGCAATCAGTAATCATTCAGTGagggtcgaatgcagcgagcgcat                      <  2:626445‑M1/138‑12 (MQ=255)
                                                                                                                          cacgtccgagTGGGAGAAGGAGCAAAACTCCATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGTGGGTGGAATGCCGCAAAAGCATc                     >  1:614504‑M1/11‑143 (MQ=255)
                                                                                                                             cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttgagccactgcgccaacaggctggctgaaatgcaatggtgcagctttttctgctgaagaatgcccggaactggcaaaggcttatcctac                  >  2:308126‑M1/1‑17 (MQ=255)
                                                                                                                              ttGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtcccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaca                 <  1:1034980‑M1/143‑128 (MQ=255)
                                                                                                                                   TTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg            >  1:394574‑M1/1‑143 (MQ=255)
                                                                                                                                     gggAGAGGGctctgctttacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaat          <  2:1026562‑M1/143‑135 (MQ=255)
                                                                                                                                      GGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggg         <  1:931077‑M1/143‑1 (MQ=255)
                                                                                                                                       GAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg        <  2:960307‑M1/143‑1 (MQ=255)
                                                                                                                                         GAAGGAGCAAAACTCAATGCAGCAACGGCCACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGa      >  1:486‑M1/1‑143 (MQ=255)
                                                                                                                                           aGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctg    <  1:585268‑M1/143‑141 (MQ=255)
                                                                                                                                             gctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataacttgcctgat  >  2:1033723‑M1/1‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                              
GTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207664‑1207947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.