New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2514275 =	NA (NA)	65 (1.000)	56/278	0.1	90.5%	intergenic (+33/‑54)	nupC/insL1	nucleoside (except guanosine) transporter/IS186 transposase
	?	NC_000913	= 2536318	7 (0.110)					coding (487/510 nt)	crr	glucose‑specific enzyme IIA component of PTS

GCCTGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTA  >  NC_000913/2514133‑2514407                                                                                                                                               |                                                                                                                                     gCCTGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCa                                                                                                                                      <  1:979630/143‑1 (MQ=255)   cTGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGCTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACACAAAAAAGCCGGGGATACATCCCAtc                                                                                                                                    >  2:366486/1‑142 (MQ=255)   cTGAATGAAGAGCAAGGTAACGTGGTTGCTCGCTTCGGTCTGCAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGCCCATACATAAAAAAGCCGGGGATAATTCCCATa                                                                                                                                    >  1:1149301/1‑143 (MQ=255)     gaatgaaGCGCAATGTAATGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAg                                                                                                                                  <  2:1094442/143‑1 (MQ=255)     gaatgaaGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGACGGGGATAATTTCCATAAg                                                                                                                                  >  2:955138/1‑143 (MQ=255)          aaGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAGAAAGGCCGGGGATAGTTGCCGTGAGCGCTa                                                                                                                             >  1:1502/1‑143 (MQ=255)           agagCAAGGTAACGTGGTGTCTCGCTTCGGTCTGAAGCTGCTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTaa                                                                                                                            <  2:143726/143‑1 (MQ=255)               cAAGGTAACGTGGGTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCGGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTa                                                                                                                        <  1:63918/143‑1 (MQ=255)                 agtggaCGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAg                                                                                                                      <  2:496110/138‑1 (MQ=255)                    tAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGt                                                                                                                   >  1:800913/1‑143 (MQ=255)                       cGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCTGGGGATAATTCCCATAAGCGCTAACTTAAGGGTtgt                                                                                                                <  1:744088/143‑1 (MQ=255)                       cGTGGTGTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTtgt                                                                                                                <  2:101238/143‑1 (MQ=255)                          ggTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGt                                                                                                             >  2:694576/1‑143 (MQ=255)                           gTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTa                                                                                                            <  1:750280/143‑1 (MQ=255)                            aatctcGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTGAGACCATACATAGAAAAGCCGGGGATAATTCCCATAGGCGCTAACCTAAGGGGCGTGGTAt                                                                                                           >  2:1074652/3‑143 (MQ=255)                              cgtcGCTGCGGGCTGAAGCTGGTGGACGGCTCTACCCTGGGGAGTGGGCGGTCGGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa                                                                                                         <  1:738731/141‑1 (MQ=38)                                   cgtCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGGGCGCTGGCTGCGGCAGTCGCGGCACTGGTGCTGGAGGAACATACATGACAACGCCGGGGAGAATCCCCAGCAGCGCTGACCTAGGGGGTGTGGTGTGACGcgt                                                                                                    >  2:623329/3‑141 (MQ=255)                                   cTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGcat                                                                                                    >  2:622973/1‑141 (MQ=255)                                    gtCGGTCTGAAGGTGGTTTGCGGCTCGAGCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATGATGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTg                                                                                                   <  2:821646/142‑1 (MQ=38)                                       tgtttGAAGCTGGTTTACGGTTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGata                                                                                                <  1:606958/139‑1 (MQ=255)                                        ttCTGAAGCTGGTTTACGGCTCTCCCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAGAGCCGGTGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat                                                                                               <  2:303832/142‑1 (MQ=255)                                        gTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGCTAATTCCCATAAGCGCTAACTTAAGGGTTGTGGGATTACGCCTGatat                                                                                               >  2:528530/1‑143 (MQ=255)                                         tCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAACAAAGCCGGGGATAATTCCCATAAGCGCTACCTGAAGGACAGTCGTACTACGCCTGagaag                                                                                              >  2:450174/1‑139 (MQ=255)                                           tGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGGGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAt                                                                                            >  2:655306/1‑143 (MQ=255)                                            gAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAtt                                                                                           <  2:657311/143‑1 (MQ=255)                                               gCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGTGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa                                                                                        <  1:566045/143‑1 (MQ=255)                                               gCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa                                                                                        <  1:332090/143‑1 (MQ=255)                                               gCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa                                                                                        >  2:644141/1‑143 (MQ=255)                                                cTGGTTTCCGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAAc                                                                                       <  1:775327/143‑1 (MQ=255)                                                cTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAAc                                                                                       <  1:768651/143‑1 (MQ=255)                                                  ggTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGt                                                                                     <  1:79975/143‑1 (MQ=255)                                                    tctACGGCTCTACCCTGGTGAGTGGGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc                                                                                   <  2:376161/141‑1 (MQ=255)                                                       aCGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATTTGATTTAACGTCCCgc                                                                                >  1:949872/1‑142 (MQ=255)                                                        cGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAAGAGCAGGACCCGCGCTGTAAGACCATACCTAAAACAGCCGGGGATAAACCCCACAAGCGCTAACCGCACAGAGCTGGAATCACGCCTGATACGATTTAACGTGcccac                                                                               >  2:137839/1‑140 (MQ=255)                                                           atctACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATGAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGaa                                                                            >  2:1137049/2‑143 (MQ=255)                                                            tctACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAt                                                                           >  2:726081/1‑143 (MQ=255)                                                            tctACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAt                                                                           <  1:694576/143‑1 (MQ=255)                                                            tctACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATATAACGTGCAGATGAAt                                                                           >  2:3126/1‑143 (MQ=255)                                                             ctACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGATGTGGTATTACGCCTGATATGCTTTAACGTGCCGATGAAtt                                                                          >  2:1079333/1‑143 (MQ=255)                                                              tACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTa                                                                         <  1:1057554/143‑1 (MQ=255)                                                                cccTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAct                                                                       >  1:1016745/1‑143 (MQ=255)                                                                     gTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAc                                                                  <  1:383244/143‑1 (MQ=255)                                                                     gTGAGTGTGCTGTCGGCGTCTAGCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAc                                                                  <  2:808824/143‑1 (MQ=255)                                                                       gAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGa                                                                <  2:965926/143‑1 (MQ=255)                                                                       gAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGa                                                                <  2:965923/143‑1 (MQ=255)                                                                           gtgCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAc                                                            <  2:1040129/143‑1 (MQ=255)                                                                            tgCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACt                                                           >  1:990721/1‑143 (MQ=255)                                                                             gCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTg                                                          >  2:716113/1‑143 (MQ=255)                                                                               tGTCTGCGGCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGt                                                        <  1:533355/143‑1 (MQ=255)                                                                                 tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCGTAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa                                                      >  2:723071/1‑143 (MQ=255)                                                                                 tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGACTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa                                                      >  1:313655/1‑143 (MQ=255)                                                                                 gcTGCGTCACTCGCAGCACTGTTCCTGTAAGACCCTACATAAAAAAGTCGGTGATAATTCTCATAAGCGCTAACTTAAGGGTTGTGGTATTTAGCTTCGTACTTTTTAACTTGCCGATGAATTACTCTCACGATAACTGGTCa                                                      <  2:821339/142‑1 (MQ=18)                                                                                  cggCGTCACTCGCAGCACTGGCGCTGTAAGGCCATACATAAAAGAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg                                                     <  2:777374/141‑1 (MQ=255)                                                                                  cTGCGTCAAGCGCAGCACTGGTGCGGTAAGATCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGAGATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg                                                     <  2:205969/143‑1 (MQ=255)                                                                                   tGCGTCAACCGCAGCACTAGTGATGTAAAACCAGACATAAAAAAGACGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGGCTGATATGATTTAACGTGCAGATGAATTACTCTCACGATAACTGGTCAGc                                                    <  1:293847/143‑1 (MQ=18)                                                                                     cGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGCTCTAACGTGCCGATGAATTACTCACACGATAACTGTTctgaaa                                                  >  2:125481/1‑138 (MQ=21)                                                                                      ggagatggcagcaCTGGGGCGGTCAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAt                                                 <  2:913466/136‑1 (MQ=18)                                                                                      gTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAAGCTCACGCTACCTGGTCAGCAAt                                                 >  2:933239/1‑143 (MQ=255)                                                                                       tCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCGAtt                                                >  1:436309/1‑143 (MQ=255)                                                                                          cttacagcaCCAGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGCTGAATTACTATCACGATAACTGGTCAGAAAtgatg                                             >  2:351058/5‑139 (MQ=18)                                                                                          aTCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg                                             >  1:1010493/1‑143 (MQ=255)                                                                                           ttacagcaCCAGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTgg                                            >  1:39929/4‑143 (MQ=255)                                                                                             gcagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGcc                                          <  1:1070851/143‑1 (MQ=255)                                                                                                 caCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCata                                      >  1:1128466/1‑143 (MQ=255)                                                                                                 caCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCata                                      >  1:288099/1‑143 (MQ=255)                                                                                                    tgttGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTg                                   <  1:143179/140‑1 (MQ=255)                                                                                                    tGGTGCGGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAACGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTg                                   <  1:696943/143‑1 (MQ=255)                                                                                                    cggagctgcacgcccATACATAAAAAAGCCGGGGATAATTCCCACAACAGACGAGATACTCTGTGGTGTATAACACCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACGGGTCAGCAATTCTGGCCCATATTg                                   <  1:262369/130‑1 (MQ=2)                                                                                                      gTGCTGTAAGACCATACATAAAAAAGCCGCGGATAATTCCCATAATCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGt                                 >  1:959294/1‑143 (MQ=255)                                                                                                         cTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCAATATTGGTAAg                              >  2:99272/1‑143 (MQ=255)                                                                                                          tGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACCTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGc                             <  1:860657/143‑1 (MQ=255)                                                                                                               gACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaa                        <  1:764835/143‑1 (MQ=255)                                                                                                               gACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaa                        <  1:644141/143‑1 (MQ=255)                                                                                                                aCCATACATAAAAAAGCCGGGGCTAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAGGAATTACCCTCACGATAACTGGTCAGCAATTCTGGCCCATGTTGGtcatgccaaag                       >  2:197906/1‑133 (MQ=17)                                                                                                                 ccATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaaga                      <  1:592180/143‑1 (MQ=255)                                                                                                                     acataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCCCGATAACTTGTCAGCAATGCTGGCCCACATTGGTAAGCCGGAAGAAccg                  >  2:778391/1‑141 (MQ=14)                                                                                                                     aaaaaaaaaaGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTg                  <  1:576189/139‑1 (MQ=255)                                                                                                                       ataAAGACGCTGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGa                <  2:778270/143‑1 (MQ=255)                                                                                                                         aaagaaGCCGGGGCTAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATa              <  2:951453/143‑1 (MQ=255)                                                                                                                                ccGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAGGAATTACGCTCACGATAACTGGGCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGc       <  1:656254/143‑1 (MQ=255)                                                                                                                                  ggggATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCAc     >  1:206616/1‑143 (MQ=35)                                                                                                                                     gATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGACGAACTGGATACTTCGGCACGTa  >  1:991082/1‑143 (MQ=21)                                                                                                                                               |                                                                                                                                     GCCTGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTA  >  NC_000913/2514133‑2514407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.