| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288917 = | NA (NA) | 50 (0.930) | 44/282 | 0.2 | 98.0% | intergenic (‑5/+146) | yejO/insH1 | pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system/IS5 transposase and trans‑activator |
| ? | NC_000913 | 3526447 = | 1 (0.020) | intergenic (‑300/‑20) | nudE/yrfF | adenosine nucleotide hydrolase, Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein | |||||
ATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289041‑2288917‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGC > NC_000913/3526447‑3526587 gTGGCGGAGAGACGGGCTAAACAGGCGGATTGAAGGCATTTACGGGAGAAAAGATCGGCTCAAACATGAAGAACTGAAATGACTGAGTGAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTGCCCTAAGTAAGATGGGGAAA < 1:638554/142‑1 ACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACC > 1:618091/1‑143 GGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGCGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGCAAAGCATGCGCACCAT > 1:773498/1‑143 TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAAGTTCCCCGCTTATTCGCACCTTCCCTAAGTAAAATGGGGAAAGCATGAGAACCATTG > 1:141340/1‑143 CTAAATAGCCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGT < 2:528684/143‑1 AATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGCCAGCCGAGAAGAATTTCCCGGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATAAGCACCATTGTGAT > 1:929641/1‑143 AGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTT < 1:367614/143‑1 gcagaaTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTT < 2:259019/137‑1 TGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTA < 1:619297/143‑1 TGATTCAAGGCATGTACGGGAGAAAAAATCCGCGCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTA < 1:858742/143‑1 GATACAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAG < 2:843700/143‑1 TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTG > 2:438877/1‑143 CAAGGCATTTACGGTAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGC < 1:371318/143‑1 AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCT > 1:705292/1‑143 ggcggTTACGGGAGAAAACATCGGCTCCAACAGGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTgt < 2:211103/138‑3 GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTT < 1:299839/143‑1 gcagtaACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTG < 2:390964/137‑1 ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGTTCCTTTttt > 1:413783/1‑140 TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTG < 2:260998/143‑1 TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGC < 2:954908/143‑1 TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCACGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGC < 2:622056/143‑1 TACGCGAGAAAAAACCAAATTAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGC < 2:735761/143‑1 GGAGAAGGATTCGGCGCAAACATGAAGAAAGGAAAGGCCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGC < 1:908021/143‑1 GGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTACGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGATTTGCTGCCCTGC > 1:49632/1‑143 AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTC < 2:618091/143‑1 GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGAAGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCA < 2:439076/143‑1 AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCAC > 2:118759/1‑143 aaaaggaGCTCGAACATGATGAAATGGAGTGACTGAGGCAGCCGAGAAGAATGTGCCCGCGTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCAGGAGCACCATTGTGAGTTTTTTAGCTGCTTTGCTGGCCTGCTCACTA < 1:658848/136‑1 CGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGCTTTTTTTAGCTGCTTTGCTGGCCTGCCCACTACTTGC > 2:742704/1‑143 GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCACTGTGATTTTTTTAGCTGCTTTGCTGGCCCGCTCGCTGCTTGCGG > 1:133579/1‑143 CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGG < 1:743965/143‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTCGCGGGCTG > 2:241185/1‑143 CATGAAGAAATGACATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAATTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCT < 1:224920/143‑1 CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTGCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCT < 1:728799/143‑1 AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACCACTGGCGGGATGGCTGATA > 2:896374/1‑143 AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAA < 2:705292/143‑1 GAAATGACCGAGTCAGCCGAGAAGAATTTCCCCGCTTAATCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATGTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGC < 1:304399/143‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGCAAGATGGGGAAAGGATTTTCACCTTTGTGATTTTTTTAGCTTCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGccc > 1:680005/1‑140 GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGCTGGCTGATAAAAGTGCGATCC > 2:266777/1‑143 gCTGAGTCAGCCGAGAAGAATTTCCCCGCTTAGTCGGACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCA < 1:538767/142‑1 CCGAGAAGAATTTCCCCGCTTATGCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCTAGACGGCGTCA < 1:530229/143‑1 GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATGAACGTGCGATCCAGACGGCGCCAGC > 1:47337/1‑143 AAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATGTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGa > 2:201368/1‑142 AATGTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCT < 2:327528/143‑1 TTTCCCCGCTTATTCGCACCTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTCCTTGCGGGATGGCTGATGCAAGTGCGATCCATGCGGCGTCAGCTGCCCTGG > 1:357885/1‑143 TTTACCCGCTTATACGCACCGGCCCGAAGTGAGAGGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGG < 2:148754/143‑1 cgacCCTTCCCGAAGGAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGC < 2:294681/139‑1 CTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATG > 2:93128/1‑143 CTTCCCTAAGTAAGATGGGGAAAGCATGAGCACCATGGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTTACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATG > 2:619094/1‑143 CCCTAAGTAAGATGTGGAAAGCATGAGCACTATTTTGATTTTTTTAGCTGCTTTGATGGCCTGCTCACGAAGTGCGGGAGGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGC < 2:100024/143‑1 ATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289041‑2288917‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGC > NC_000913/3526447‑3526587 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |