New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2288917 =	NA (NA)	50 (0.930)	44/282	0.2	98.0%	intergenic (‑5/+146)	yejO/insH1	pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system/IS5 transposase and trans‑activator
	?	NC_000913	3526447 =	1 (0.020)					intergenic (‑300/‑20)	nudE/yrfF	adenosine nucleotide hydrolase, Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

TTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTT  >  NC_000913/2288776‑2289051                                                                                                                                                |                                                                                                                                       ttttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaagg                                                                                                                                       >  1:955523/1‑143 (MQ=255) ttttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaagg                                                                                                                                       >  1:712187/1‑143 (MQ=255) tgttAGATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaagg                                                                                                                                       <  2:116451/141‑1 (MQ=255)   ttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACCGTTGATGCCAATGCTATGGGGGGATAGcaggaa                                                                                                                                     >  1:213380/1‑143 (MQ=255)    tataTGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATCAACCAGCTGGAT‑‑ATCTTTTTCCCGGACAACACCATCAACTGTCCCACCATCCCCCACAGTTACAGCCAACGCTATGGGTGAATATacggacg                                                                                                                                    >  1:364227/1‑141 (MQ=255)        tGCTGGTCTCCGCCAGGATTGATTTTCGTATTGTTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGc                                                                                                                                <  1:663605/143‑1 (MQ=255)         gCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCg                                                                                                                               >  1:733085/1‑143 (MQ=255)           tGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCACATAAAATAGGTGGGTTGGTCGTGTTCAGTAACAAGTACTT‑‑ACTTTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGaa                                                                                                                             >  2:221765/1‑143 (MQ=255)              tctcCGCCAGGATTGATTTTCGTATTATTGGCGTTCCCATACACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCCATGGGTGAATATAAGGCAGGTGCGAATaa                                                                                                                          >  1:837789/1‑143 (MQ=255)                 ccGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCg                                                                                                                       <  1:851467/143‑1 (MQ=255)                  cGCCATGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGcta                                                                                                                      <  1:390672/143‑3 (MQ=255)                  agcctctattgattTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCgg                                                                                                                      <  2:690747/136‑1 (MQ=255)                    ctagcgttgattTCCGGATTCGTGGCGGTAACATAAACCACCTGAAT‑‑ATATTTTTCCAGGACAAAACCATCAACTGTCTCACCATATTCAACCGTTGATGCTAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCgggg                                                                                                                    <  1:197049/137‑1 (MQ=255)                    ccAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCgggg                                                                                                                    <  2:571762/143‑1 (MQ=255)                     cAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGCACCCGCCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGa                                                                                                                   <  2:442338/143‑1 (MQ=255)                      aGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCTTCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGaa                                                                                                                  >  2:857257/1‑143 (MQ=255)                      aGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGATGAGAATGAGCGGGGac                                                                                                                  >  2:844973/1‑142 (MQ=255)                          ttgattTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAttc                                                                                                              <  2:955523/143‑1 (MQ=255)                             attTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAttcttc                                                                                                           >  2:686108/1‑143 (MQ=255)                              ttttCGTATTATTGGCGGTCCCATAGACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATAGACTGCCGCAGCATACGCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATtcttct                                                                                                          <  1:929698/143‑1 (MQ=39)                               tttCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCGGGACAACACCATCAACTGTCTAACCATACTCAACAGTTGATGCCAACGCTATCGGTGAATATCAGGAAGGTGCGACTAGGCGGGGAAAttcgtcac                                                                                                         >  1:362797/1‑141 (MQ=255)                                 tCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCgg                                                                                                       <  2:363868/143‑1 (MQ=255)                                    tattatTGGCGGTCCCATAAAACAGCTGGAT‑‑ATGTTTTTCCAGGACAACACCATCACCTGTCTCACCATACTCAACAGTTGATGCCAAAGCTATGGGTGAATATAAGGAAGGTGGGACTAAGCGGGGAAATCATACTCGGCTg                                                                                                    >  1:363591/1‑143 (MQ=255)                                      ttattGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAc                                                                                                  >  1:658667/1‑143 (MQ=255)                                         ttGGTGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa                                                                                               >  2:468850/1‑143 (MQ=255)                                         ttGGCGGTCCTATAAGACAGCGGGAT‑‑ATCTTTTCCCTGGACAACACCATCAGCTGTCTTACCATGCTCTACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa                                                                                               <  1:617891/143‑1 (MQ=37)                                                    aTAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcgtttcatt                                                                                    >  2:143199/1‑143 (MQ=255)                                                             ctgttt‑‑atCTTTTTCCAGGACAACACTATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTTAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                                                           <  2:548890/138‑1 (MQ=255)                                                               ggAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt                                                                         <  2:855990/143‑1 (MQ=255)                                                               ggAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt                                                                         <  2:712187/143‑1 (MQ=255)                                                                     atCTTTTTCCAGGACAACTCCTTCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGc                                                                     <  1:104815/143‑1 (MQ=255)                                                                      tCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATATCATCTCTTCACGTTTCAGcc                                                                    >  1:586766/1‑143 (MQ=255)                                                                      tCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATACTTCTCGGCTGACTCAGTCATTTCATTTCTTCCTGTTTGAGcc                                                                    >  1:122382/1‑143 (MQ=255)                                                                        tttttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGa                                                                  >  1:817289/1‑143 (MQ=255)                                                                              cAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGCGAAATTCTTCTCGGCTGAGTCAGCCCTCTCATTCCTTCATGTTTGAGCCGAtttttt                                                            >  1:8367/1‑143 (MQ=25)                                                                               aGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATACGGACGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCGTTTCCTTTCTTCATGTTTGAGCCGATTTTTtc                                                           >  2:367427/1‑143 (MQ=255)                                                                               aGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc                                                           >  2:340673/1‑143 (MQ=255)                                                                                       acCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATATCTTCATGTTTGATCCGATTTTTGCTCCCGTaa                                                   >  1:713071/1‑143 (MQ=255)                                                                                           tctgcTGTCTCACCATACTCAACAGTGGATGCCAGTGCTGTGGGTGACTATAAGGAAGGTGCGAAGAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGc                                               <  1:189168/139‑1 (MQ=18)                                                                                             aacgggctcACCATCCTCAACAGTTGATGCCAAGGCTAGGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCt                                             <  1:541641/137‑1 (MQ=18)                                                                                              aCTGTCTCACTATACTGAACAGTTGATGCCTATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCGGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt                                            <  2:716832/143‑1 (MQ=255)                                                                                                   ctcACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGTAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATc                                       >  2:857328/1‑143 (MQ=255)                                                                                                      aCCATACTCAACAGTTGCTGCCAGTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                    <  1:452873/143‑1 (MQ=255)                                                                                                      aCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                    <  2:733681/143‑1 (MQ=255)                                                                                                      aCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCAGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAgt                                    >  2:85788/1‑142 (MQ=255)                                                                                                        cATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCt                                  >  1:748491/1‑143 (MQ=255)                                                                                                           aCTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAtt                               <  2:748491/143‑1 (MQ=255)                                                                                                             tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                             >  2:540772/1‑143 (MQ=255)                                                                                                             tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                             >  2:153844/1‑143 (MQ=255)                                                                                                             tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                             >  1:355014/1‑143 (MQ=255)                                                                                                             tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAAGAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                             >  2:912742/1‑143 (MQ=255)                                                                                                             tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGGGCGAGTAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                             >  2:405723/1‑143 (MQ=255)                                                                                                              gagcAGTGGATGCGAATGCTATGGGGGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCGCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATGTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAg                            <  1:728967/140‑1 (MQ=14)                                                                                                              cagcAGTTGAGGCCAATGCGATGGGTGAATATAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAg                            <  1:310846/140‑1 (MQ=255)                                                                                                               accAGTTGATGCCAATGCTACGGGTGACTATAGGAACGGTGAGAACTAGTGGGCGCATTAATCCAAGATGACTTTGTCATTTCATTTCTTCATGTTTGAGCCGATCTATTGCTTTGGAAATGCCTTGAATCAGCCTATTTAGa                           <  1:468850/141‑1 (MQ=9)                                                                                                               aaCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGCTTTTTTCTCCCGTGAATGCCTTGAATCAGCGTATTTAGa                           >  2:98740/1‑143 (MQ=255)                                                                                                                   gTTCATGGCGATGCTAGGGGTGAATATCACGAAGGTGCGAAGAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGt                       <  2:186253/143‑1 (MQ=14)                                                                                                                     tGATGCTAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGttt                     <  2:299324/143‑1 (MQ=255)                                                                                                                      gATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTCGAGCCGATTTTTTCTCCCGTAACTGCCTTGCTTCCCCCTACTTAGTCCTTttc                    >  2:298195/1‑143 (MQ=17)                                                                                                                         gCCGATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc                 <  1:849927/143‑1 (MQ=255)                                                                                                                         gCCAATGCTATGGGTGAATATCAGGAAGGTCTGTAGTAGCGTTGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAACTGCCTTGAATCAGCCTATTTAGACCGTtccttc                 >  1:784025/1‑143 (MQ=14)                                                                                                                            aaTGCTATGGTTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGcc              <  1:844973/143‑1 (MQ=255)                                                                                                                            aaTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGcc              <  1:857257/143‑1 (MQ=255)                                                                                                                             aTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGACTATTTAGACCGTATCTTCGACa             >  2:928443/1‑143 (MQ=255)                                                                                                                                cTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCCTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATACCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAttt          >  2:722334/1‑143 (MQ=255)                                                                                                                                 tATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTGTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCTTTTa         >  2:83469/1‑143 (MQ=255)                                                                                                                                   tGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg       <  2:733085/143‑1 (MQ=38)                                                                                                                                    gggTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACAGTTTCTTCGCCGTCTAAgg      >  1:821220/1‑143 (MQ=255)                                                                                                                                      gTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCCTTTAAGTCg    >  1:647891/1‑143 (MQ=25)                                                                                                                                        gAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTCGACCGTTTCTTCGCCATTTCAGGCGtt  >  1:947326/1‑143 (MQ=18)                                                                                                                                        gAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATAAGCCTATTTAGACCGATTCTTCGCCATTTAAGGCttt  >  1:443185/1‑143 (MQ=16)                                                                                                                                                |                                                                                                                                       TTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGAT‑‑ATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTT  >  NC_000913/2288776‑2289051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.