New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3845530 = | 32 (0.590) | 45 (0.900) | 40/262 | 0.2 | 56.7% | coding (1568/1767 nt) | adeD | cryptic adenine deaminase |
? | NC_000913 | = 3992759 | 39 (0.780) | coding (1608/2547 nt) | cyaA | adenylate cyclase |
AGCCCCTGACTGGTTAGTTTTAGCGCGGGGATCACTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3845680‑3845530 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgtcggtgcAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGTTAAACCATGCCCACGCCACCAG < NC_000913/3992759‑3992622 AGCCCCCGACTGGTTAGTTTTAGCGCGGGGATCACTG‑GCAGAGAAAGAAACGCCATCTGAATCGTACGCCGGTCGTGTAACGGCCCGCATTCACTGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGT < 2:700608/143‑1 CCCCTGACTGGTTAGTTTTAGCGCGGGGATCACGG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGT < 1:902722/143‑1 gatACTGGGTAGTTATAGTCCGCGGCTCATGG‑TCAGAGAAAGAAACGCCATCTGAATAATCGGCTCAGCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTGCCGCCAGCGACTGCGCCGTGTCGG < 2:303399/140‑1 TGACTGGTGAGTTTTAGCGCGGGGATCGCTGTGTCGTCATCG‑TGCGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGT < 1:673598/143‑1 ACTGGTTAGTTTTAGCGCGGGGATCACTG‑GCAGAGAAAGAACCGCCTTCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGC < 1:44900/143‑1 ACTGGTGAGTTTCAGCGCGGCGATCACTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGC < 2:148648/143‑1 CTGGTTAGTTTTAGCGCGGGGATCACTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCA > 2:6329/1‑143 GGTTAGTTTTAGCGCGGGGATCACTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGG < 2:641380/143‑1 AGTTGTAGCGGGGGGATCGCTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATGCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAG < 2:145844/143‑1 TTTTAGCGCGGGGATCACTG‑GCAGAGAAAGAAACGCCATCTGAATAACCGGCTCATCGGGTAACGGACCGCGTTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCG > 2:219654/1‑143 CGCGGGGATCACTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGG > 1:386864/1‑143 CGCGGGGATCACTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGG > 2:102136/1‑143 GCGGGGATCACTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGG > 2:950785/1‑143 GCGGGAATCACTG‑GCAGAGAAAGAAGCGCCGTCTGAATAAACGGCTCAGCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGG < 2:413087/143‑1 ggcttcacgcGCAGAGAAAGAAACGCCATCTGAATACGCGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAA < 2:242863/133‑1 gaacactttCAGAGAAAGCAACGCCATCTGAATAAACGGCTCATCGGGTAGCGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATG < 2:169506/134‑1 TCACTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCCCGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGGCGTGTCGGTGCTGGTACGCGCAGCGGGGAATGGT > 2:389659/1‑143 CACTG‑GCAGAGAAAGAAACGGCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTG < 1:340349/143‑1 CACTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTG < 2:456980/143‑1 TG‑GCAGAGAACGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGA < 2:278884/143‑1 ggAAGAAACGCCATCTGAATAAGCGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCG < 1:448798/141‑1 AAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGG > 2:582587/1‑143 GAAAGGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCGAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGA < 2:148051/143‑1 AAACGCCTTCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGAC < 1:102136/143‑1 AAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTACGCGCAGCGGGAAATGGTGCGACACGTCGGCGgc > 2:171785/1‑141 GCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTCTCACGGCGCCAATTTGTTCCGCCAGCGACTGCGCCGCGTCGGTGCAGGTCAGCGCAGCGGGAACTGGTGCGCCACGTCGGCGACCATC > 1:175898/1‑143 ATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGACATGGTGCGACACGTCGGCGCCCATCTCC > 2:455934/1‑143 CTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGGAATGGTGCGACACGTCGGCGACCAGCTCCTG > 2:299249/1‑143 gggtgagCGGGTAAAGGACCGCGATGGCGGGCGGCGGCGTGCAAGGCGGCAAGTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGC < 2:74487/136‑1 aagcCGGGTAACGGACCGTGCTCACGGGCGGCTGCGTTCTAGGCGTGAATTTGTGCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCGGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAA < 1:610436/139‑1 GTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTCTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCCCCTGCCACCTACGCCGCTCGACAc > 2:137599/1‑142 CGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCC > 1:192468/1‑143 CCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGCCCATCTCCTGCAACTTAGGCAAATCGACACTGCCGTTA > 1:585440/1‑143 GGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACCCGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAA < 2:920195/143‑1 GCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAA > 1:23140/1‑143 GCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAA < 2:430203/143‑1 CGGCTTTCAAGGCGTCAATTTGCTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAAC < 2:301209/143‑1 cCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGG < 2:274395/142‑1 GCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCCAATCGACAATGCCGTTACCCTTAATATACAGACGG > 2:163762/1‑143 TTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGCTACCTTTAATATACAAACAGGTG > 2:719705/1‑143 AAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGAAACTAAAGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGC > 1:421519/1‑143 AATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTGATATACAAACGGGTGCGCGAGGTCgg > 2:329252/1‑141 CCGCCAGCGACTGCGGCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGT < 1:166992/143‑1 CCGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAAGGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGT < 2:192468/143‑1 CGCCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGTT < 1:582587/143‑1 GCCGGCGCCCGCGCCTGGTCGGTGCACGCAAGCCCAGCGGGAAATGGTCCGACACGTCGGCGACCATCTCCTGCAACTTACGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGTTA < 1:451608/143‑1 ccagggccgGCGCCGGGTCGGTGCAGGTAAGCGTAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGTTAA < 1:119872/134‑1 CCAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGTTAA > 2:156982/1‑143 CAGCGACTGCGCCGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACACACGGGTGCGCGAGGTCAGCAGGCCGTTAAA > 1:557679/1‑143 ggaccCGCCGGGGCGGTGCGGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGTTAAACCAT < 1:325086/138‑1 CGTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTTATATACAAACGGGTACGCGAGATAAGCAGGCCGTTAAACAATGCACACGa > 2:310918/1‑142 GTGTCGGTGCAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGGCCATCTCCTGCAACTTAGGCAAATCGCCACTGCCGTTACCTTTAATCTACAAAAGGGTGCCCGCGGCACGCCGGCCGTAAAACCACACCCACGCC > 1:923849/1‑143 CGGTGCACGTAAGCGCAGCGGGAAGTGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGTTAAACCATGCCCACGCCACCA < 2:273610/143‑1 GGTGCAGGTAAGCCCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGTTAAACCATGCCCACGCCACCAG < 2:419586/143‑1 AGCCCCTGACTGGTTAGTTTTAGCGCGGGGATCACTG‑GCAGAGAAAGAAACGCCATCTGAATAAACGGCTCATCGGGTAACGGACCGCATTCACGGGCGGCGGCTTTCAAGGCGTCAATTTGTTCCGCCAGCGACTGCGCCGTGTCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3845680‑3845530 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgtcggtgcAGGTAAGCGCAGCGGGAAATGGTGCGACACGTCGGCGACCATCTCCTGCAACTTAGGCAAATCGACAATGCCGTTACCTTTAATATACAAACGGGTGCGCGAGGTCAGCAGGCCGTTAAACCATGCCCACGCCACCAG < NC_000913/3992759‑3992622 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |