New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3845530 =32 (0.590)45 (0.900) 40/262 0.2 56.7% coding (1568/1767 nt) adeD cryptic adenine deaminase
?NC_000913 = 3992759 39 (0.780)coding (1608/2547 nt) cyaA adenylate cyclase

CTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTG  >  NC_000913/3992622‑3992901
                                                                                                                                         |                                                                                                                                              
cTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGGGCTTACCTgcacc                                                                                                                                           <  2:419586‑M2/143‑6 (MQ=255)
 tggtggCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCACTTCCCGCTGCGCTTACGTgcaccg                                                                                                                                          <  2:273610‑M2/143‑7 (MQ=255)
     ggCGTGGGTGTGGTTTTACGGCCGGCGTGCCGCGGGCACCCTTTTGTAGATTAAAGGTAACGGCAGTGGCGATTTGCCTAAGTTGCAGGAGATGGCCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacac                                                                                                                                      >  1:923849‑M2/1‑133 (MQ=255)
      tcgTGTGCATTGTTTAACGGCCTGCTTATCTCGCGTACCCGTTTGTATATAAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacg                                                                                                                                     >  2:310918‑M2/2‑132 (MQ=255)
       cGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGCTTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATACGCCGCGCCGCCTCCCTGccccgacaccg                                                                                                                                    >  1:542532/1‑143 (MQ=255)
         cgggtcgggTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTGGCAGGCGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGaa                                                                                                                                  <  1:357729/136‑1 (MQ=255)
              aTGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCCgcaccgccccggcgggtcc                                                                                                                             <  1:325086‑M2/143‑20 (MQ=255)
                 gTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGctct                                                                                                                          >  2:293014/1‑143 (MQ=255)
                  tttAACGGCCTGCTGACCTCGCGCACCCGTGTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctg                                                                                                                         >  1:557679‑M2/1‑120 (MQ=255)
                  tttAACGGCCCGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTa                                                                                                                         <  2:21077/143‑1 (MQ=255)
                   ttAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctgg                                                                                                                        >  2:156982‑M2/1‑119 (MQ=255)
                   ttAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTACGCTTACCTgcaccgacccggcgccggccctgg                                                                                                                        <  1:119872‑M2/143‑25 (MQ=255)
                    tAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCGTAAGTTGCAGGAGATGGTCGCCGACGTGTCGGACCATTTCCCGCTGGGCTTGCGTgcaccgaccaggcgcgggcgccggc                                                                                                                       <  1:451608‑M2/143‑26 (MQ=255)
                     aaCGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcg                                                                                                                      <  1:582587‑M2/143‑27 (MQ=255)
                      aCGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCCTTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcgg                                                                                                                     <  2:192468‑M2/143‑28 (MQ=255)
                      aCGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacgccgcagtcgctggcgg                                                                                                                     <  1:166992‑M2/143‑28 (MQ=255)
                              ccgacCTCGCGCACCCGTTTGTATATCAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaatt                                                                                                             >  2:329252‑M2/3‑108 (MQ=255)
                                     cgcgGACCCGTTGTGAGATTAAGGGTGACGGCATTGTCGGTTTGCCTAAGTTGCAGGAGATGGGCGCCGACGTGTCGCAGCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGc                                                                                                      <  2:884573/143‑1 (MQ=255)
                                      gcgcACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCTTTAGTTTCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgcctt                                                                                                     >  1:421519‑M2/1‑100 (MQ=255)
                                         cACCTGTTTGTATATTAAAGGTAGCGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaa                                                                                                  >  2:719705‑M2/1‑97 (MQ=255)
                                            ccGTTTGTATATTAACGGTAACGGCATTGTCGATTTGCCTACGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCCGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTgg                                                                                               <  1:602970/143‑1 (MQ=255)
                                            ccGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagg                                                                                               <  2:274395‑M2/143‑50 (MQ=255)
                                            ccGTCTGTATATTAAGGGTAACGGCATTGTCGATTGGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagc                                                                                               >  2:163762‑M2/1‑94 (MQ=255)
                                              gTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggagcaaattgacgccttgaaagccg                                                                                             <  2:301209‑M2/143‑52 (MQ=255)
                                              gTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCATGTgagaacaacaatcgatcg                                                                                             >  1:818733/1‑129 (MQ=255)
                                               tttGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgc                                                                                            >  1:23140‑M2/1‑91 (MQ=255)
                                               tttGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgc                                                                                            <  2:430203‑M2/143‑53 (MQ=255)
                                                ttGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGGGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgcc                                                                                           <  2:920195‑M2/143‑54 (MQ=255)
                                                   tataTCAAGGGTGACGGCTTGGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTAt                                                                                        <  1:133998/143‑1 (MQ=255)
                                                   cacatTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTAt                                                                                        <  2:356264/140‑1 (MQ=255)
                                                       tccagtgtgaCGGCAGTGTCGATGTGCCTATGTTCGAGGTGATGGTCGCCGACGTGTCGGACCGTTTCCCGCTGCGCTTACCTGCTCCTCCACCGAAGGCCCTTTACAGCCCGTGTGAGATCCGCCATCTGGCGACTATCCtt                                                                                    <  1:473610/134‑1 (MQ=255)
                                                         aaaGGTAACGGCATCGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTaa                                                                                  <  2:848367/143‑1 (MQ=255)
                                                              tAACGGCAGTGTCGATTTGCCTAAGTTGCAGGAGATGGGCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcgg                                                                             >  1:585440‑M2/1‑76 (MQ=255)
                                                               aaCAGCATTAGCGAGTTGCCTAAGGTGCAGGAGACGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGa                                                                            <  2:64254/143‑1 (MQ=255)
                                                                aCGGCATTGTCGATGTGCCGAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTACGCTTCCAGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAat                                                                          <  2:697993/143‑1 (MQ=255)
                                                                  ggCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccg                                                                         >  1:192468‑M2/1‑72 (MQ=255)
                                                                      gtgTCGAGCGGCGTAGGTGGCAGGGGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgagacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttac                                                                     >  2:137599‑M2/2‑68 (MQ=255)
                                                                           gATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGCTCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGAc                                                                >  2:744533/1‑143 (MQ=255)
                                                                             tttGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCCGCGCTTACCTgcaccgacacggcgcagtcgctggcggcacaaattcacgcctagaacgcagccgcccgtgagcacggtccgttacccggctt                                                              <  1:610436‑M2/143‑83 (MQ=255)
                                                                                gCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaacttgccgccttgcacgccgccgcccgccatcgcggtcctttacccgctcaccc                                                           <  2:74487‑M2/143‑86 (MQ=255)
                                                                                 ccTAAGTTGCAGGAGATGGTCGCCGACGTGTGGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGACGGCGCTCTACAGCCCGTGCGAGATCCGCCCTCTGGCGCTTATCGTTAACCTCGACTATGACCCGACAgcggc                                                          >  1:936614/1‑143 (MQ=255)
                                                                                     ggTTGCAGCAGCTGGTCGCCGGCGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCTCTCTACAGCCCGTGTGAGATCCGCCTTCTGGCGATTATCGTTAACCTGGAATATGACCAGACAGCGGCGTTc                                                      <  1:343999/142‑1 (MQ=255)
                                                                                       ttGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATACTCTATAACCTGGAATATGACCCGACAGCGGCGTTCCg                                                    >  2:901301/1‑143 (MQ=255)
                                                                                       ttGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCCTACCTGCACCGACACCGAAGGCGCCCTACCGCACGTGTGAGATCCGCCATCTGGCGATTATCGTTATCCTGGAATATGACCCGACAGCGGCGTTccc                                                    >  1:240019/1‑142 (MQ=255)
                                                                                          cAGGAGCTGGTCGCCGACGTGTCGCACCATTCCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcag                                                 >  2:299249‑M2/1‑48 (MQ=255)
                                                                                           aGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTCTCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCCAt                                                >  2:474847/1‑143 (MQ=255)
                                                                                            ggAGATGGGCGCCGACGTGTCGCACCATGTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagat                                               >  2:455934‑M2/1‑46 (MQ=255)
                                                                                             gagaTGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCa                                              >  2:260148/1‑143 (MQ=255)
                                                                                               gtttgTCGCGGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAgg                                            <  2:808111/139‑1 (MQ=255)
                                                                                               gaTGGTCGGCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAgg                                            <  1:273610/143‑1 (MQ=255)
                                                                                               gaTGGTCGCCGACGTGGCGCACCAGTTCCCGCTGCGCTGACCTgcaccgacgcggcgcagtcgctggcggaacaaattggcgccgtgagagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggc                                            >  1:175898‑M2/1‑43 (MQ=255)
                                                                                                 ttgTCGCCGGTGCGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGATGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAggtg                                          <  1:102656/141‑1 (MQ=255)
                                                                                                   gccgcCGACGTGTCGCACCATTTCCCGCTGCGCGTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgttt                                        >  2:171785‑M2/3‑39 (MQ=255)
                                                                                                   gTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagaaggcgttt                                        <  1:102136‑M2/143‑105 (MQ=255)
                                                                                                   gTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCGATCTGGCGATTGTCGTTAACCTCGAAGAGGACCACACAGAGGCGGTCCGCAGTCAggtggt                                        >  1:395720/1‑143 (MQ=255)
                                                                                                    tCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTGCCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGgtggtg                                       <  1:505561/143‑1 (MQ=255)
                                                                                                    tCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctcgcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcctttc                                       <  2:148051‑M2/143‑106 (MQ=255)
                                                                                                    tCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTGCAGCCCGTGTGAGATCCGCCATCTGGCGCTTATCGTTAACCTGGAATATGACCCAACAGCGCCGTTcccccacccggtgacg                                       >  2:345603/1‑129 (MQ=255)
                                                                                                      gCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGCGTGAGATCCGCCATCTGGCGACGATCGTTACCCGGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCa                                     >  1:680730/1‑143 (MQ=255)
                                                                                                       ccGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttcttt                                    >  2:582587‑M2/1‑35 (MQ=255)
                                                                                                        cGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgcttattcagatggcgtttcttcc                                   <  1:448798‑M2/143‑110 (MQ=255)
                                                                                                              gtCGCACCATTTCCCGCTGCGCTTACCTGCAACGACACCGAATGCGCTCTACAGCCCGTGTGAGATTTGCCATTTGGCGATTATCGTTAACCGGGAATATGCCCCGACGGAGGGCTTCCTCATTTAGGTGGGACATTGCGact                             >  1:571513/1‑141 (MQ=255)
                                                                                                               tCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttcgttctctgcca                            <  2:278884‑M2/143‑117 (MQ=255)
                                                                                                               tCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACCGCCCGTACGGGCGCCGCCAGCCGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGGTACGGAATCAGGTGGTGCATTTCGAgtt                            >  1:158470/1‑143 (MQ=255)
                                                                                                               tCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCCACAGCCCGTGTGAGAACCGCCATCTCGCGCTTATCGTTAGCCTGGAATATGACCGGACAGCGGGGTTACGCCACCAGGAGCTGCATCTCGAtgt                            >  1:14384/1‑141 (MQ=255)
                                                                                                                 tcACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTcc                          <  1:586825/142‑1 (MQ=255)
                                                                                                                 gCACAAATTCCCGGTGCGCTTACCTGCAACGACACCGAAGGCGCTCTACAGCCCGTGTGACGTCCGCCAGCTGGCGATTATCGATAACCTGGAATATGACGCGACAACGGCGTTACGCAACAAggaggtagaaagcgaagtcc                          >  1:246673/1‑129 (MQ=255)
                                                                                                                  cACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtg                         <  2:456980‑M2/143‑120 (MQ=255)
                                                                                                                  cACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatgccgtttctttctctgccagtg                         <  1:340349‑M2/143‑120 (MQ=255)
                                                                                                                   aCCATTCCCCGCTGCGCGTACCAgcaccgacacgccgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgggaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtga                        >  2:389659‑M2/1‑23 (MQ=255)
                                                                                                                     cATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgctacccgatgagccgtttattcagatggcgttgctttctctgaaagtgttc                      <  2:169506‑M2/143‑123 (MQ=255)
                                                                                                                       tttCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgcgtattcagatggcgtttctttctctgcgcgtgaagcc                    <  2:242863‑M2/143‑125 (MQ=255)
                                                                                                                        ttCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTCCCGCCATCCGGGGGCGCAGTTCGAGTTGCGTAGGcg                   >  1:692863/1‑142 (MQ=255)
                                                                                                                         tCCCGCTGCGCTTACCGGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTg                  <  1:372691/143‑1 (MQ=255)
                                                                                                                          cccGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgctgagccgtttattcagacggcgcttctttctctgccagtgattcccgc                 <  2:413087‑M2/143‑128 (MQ=255)
                                                                                                                          cccGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtgatccccgc                 >  2:950785‑M2/1‑16 (MQ=255)
                                                                                                                           ccGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtgatccccgcg                >  1:386864‑M2/1‑15 (MQ=255)
                                                                                                                           ccGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtgatccccgcg                >  2:102136‑M2/1‑15 (MQ=255)
                                                                                                                             gCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGGGTGAGATCCGCCATCTGGCGATTAGCGTTAACCTGGAATATGACCCGCCAGCCGCGTTCCGCAATCAGGTGGTGCATCTCGGTTTCCGTATgctggctg              >  2:375956/1‑143 (MQ=255)
                                                                                                                                 cgcTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaacgcggtccgttacccgatgagccggttattcagatggcgtttctttctctgccagtgatccccgcgctaaaa          >  2:219654‑M2/1‑9 (MQ=255)
                                                                                                                                   cTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgcatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagcgatccccccgctacaact        <  2:145844‑M2/143‑137 (MQ=255)
                                                                                                                                    ttACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATATCCGTAAGCTGGATGTCTTCAg       >  1:805350/1‑143 (MQ=255)
                                                                                                                                     tACCTGCACCGACACCGGAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGc      <  2:550160/143‑1 (MQ=255)
                                                                                                                                       ccTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtgatccccgcgctaaaactaacc    <  2:641380‑M2/143‑141 (MQ=255)
                                                                                                                                        cTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTGGCTTTCCGTAAGCGGGAGGTCGTCAGCtct   >  2:18437/1‑141 (MQ=255)
                                                                                                                                         tgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtgatccccgcgctaaaactaaccag  >  2:6329‑M2/1‑1 (MQ=255)
                                                                                                                                         tGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTg  >  2:271644/1‑143 (MQ=255)
                                                                                                                                         |                                                                                                                                              
CTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTG  >  NC_000913/3992622‑3992901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.