New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 272944233 (0.670)17 (0.400)
+GTATCAGTCTGCTTCGCAAG		 4/242 6.2 30.8% noncoding (1/76 nt) gltW tRNA‑Glu
?NC_000913 = 4168264 56 (1.130)intergenic (+65/‑107) rrsB/gltT 16S ribosomal RNA of rrnB operon/tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.

ATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2729329‑2729442
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTAC  <  NC_000913/4168264‑4168219
                                                                                                                  ||||||||||||||||||||                                              
agatgaAGGCCGGCGCCTTTCACTCACAAACCGGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGC                                       <  1:780620/137‑1
              GACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTAT                         <  1:359957/143‑1
                cttttcCTCACGAACCAGCAAGTGGCGTACATGAACGGATTCGATCCCCTCTTTCCTCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTATCA                       <  1:341717/137‑1
                CTTTCACTTACAAATCAGGAAGGTGCGTCCCCTGGGGGATTCGAACTCCTGTTAGCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTATCA                       <  1:661843/143‑1
                CTTTCACTCACAAACCAGCAATTTACGTCCCCTATAGAATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTACACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTATCA                       <  2:83052/143‑1
                 TTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTATCAc                      >  1:401915/1‑142
                     ACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCACCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACGTTCTATCAGACAA                  >  1:103424/1‑143
                       TCACAAACCAGCAAGTGGCGTCCCCTAGGGGGTTCGAACCCCTGTTACCGCCGTGCAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCAGTTACTGTCGGAgaccg                >  2:455663/1‑138
                         ACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTATCAGACAATCTG              >  2:410004/1‑143
                         ACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTCAAAGGCCAGTGTCCTGGCCCTCTCCACGAAGGGGCCGTATCAGGCTGCTACGCAAGACGCCCTGCTCTTCACTTTCTCCCAGACACTCTG              >  1:563664/1‑143
                          CAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGGACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTACCAGACAATCTGT             <  1:500789/143‑1
                          CAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTATCAGACAATCTGT             >  2:316757/1‑143
                           AAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCGGTGAAGGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCGTCGCAAGCCGCCTTGGTTTTCACTGTCTATCGGACAATCcggg            >  1:467198/1‑139
                              CCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTATCAGACCATCTGTGTGA         >  1:271202/1‑143
                                   cAGTGGCGGCCCCTGGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGCAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACT    <  1:555763/142‑1
                                   AAGGGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACT    <  1:39684/143‑1
                                     GTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGAGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTCCTTCGCAAGACACGCTCCTTTTCACTTCCTATCAGCGCATCTCTCTGAGCcccgc  >  2:714957/1‑138
                                                                                                                  ||||||||||||||||||||                                              
ATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2729329‑2729442
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTAC  <  NC_000913/4168264‑4168219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.