| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 119 [0] | [0] 125 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 119 (1.650) | 50/68 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
Only 100 of 119 total aligned reads displayed.
GCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165117‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > NC_000913/2177211‑2177244 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 1:4930455/1‑35GCTCATACTTTAATCGGTAAACAGCACCTTTAGAA < 1:4275680/35‑1GCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 1:2689561/1‑35 CTCATACTTTAATCGGTAAACAGCACCTTTAGAAT < 1:5302243/35‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAAT > 1:2290539/1‑35 CTCATACTTTAATCGGTAAACAGCACCTTTAGAAT > 1:7523593/1‑35 CTCATACTTTAATCGGTAAACAGCACCTTTAGAAT < 1:4172699/35‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAAT < 1:7290294/35‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAAT > 1:2732908/1‑35 CTCATACTTTAATCGGTAAACAGCACCTTTAGAAT > 1:3331127/1‑35 TCATACTTTAATCGGTAAACAGCACCTTTAGAATC < 1:6468077/35‑1 CATACTTTAATCGGTAAACAGCACCTTTAGAATCC < 1:5199180/35‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCT > 1:4060171/1‑35 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCT > 1:6899790/1‑35 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTG > 1:2405998/1‑35 ACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT < 1:411635/35‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC > 1:3120967/1‑35 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC > 1:5495066/1‑35 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCG < 1:3904737/35‑1 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCG < 1:1100965/35‑1 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCG < 1:5622040/35‑1 TTAATCGGTAAACAGCACCTTTAGAATCCTGTCGT > 1:5276776/1‑35 TTAATCGGTAAACAGCACCTTTAGAATCCTGTCGT > 1:5276816/1‑35 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTT > 1:2316547/1‑35 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTT > 1:5330524/1‑35 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTT > 1:3800228/1‑35 AATCGGTAAACAGCGCCTTTAGAATCCTGTCGTTT < 1:3581888/35‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT < 1:7145825/35‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT > 1:7643822/1‑35 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT > 1:4410524/1‑35 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT > 1:1812374/1‑35 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG > 1:1581612/1‑35 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGT > 1:2015690/1‑35 CGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:4876518/35‑1 CGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:2106747/35‑1 CGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:4772847/35‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT < 1:3338206/35‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT > 1:2287230/1‑35 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT > 1:3502025/1‑35 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT > 1:7340145/1‑35 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT < 1:3204999/35‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT > 1:2022197/1‑35 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT < 1:556939/35‑1 GTAAACAGCACCTTTAGAATCGTGTCGTTTGTTTT < 1:1267772/35‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:1482044/35‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:2660700/35‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:7788027/35‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:1291295/35‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:1882728/35‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT > 1:6062130/1‑35 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:3387649/35‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:1586312/1‑35 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:3255195/35‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:6314269/35‑1 AAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCG > 1:560726/1‑35 AAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCG > 1:7302524/1‑35 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA < 1:6521503/35‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA < 1:7830592/35‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:4842328/1‑35 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA < 1:376363/35‑1 ACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT < 1:662300/35‑1 ACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT < 1:6394520/35‑1 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT > 1:4255227/1‑35 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:111051/35‑1 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:5129118/35‑1 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:6252430/35‑1 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:5829989/35‑1 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC > 1:5167073/1‑35 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC < 1:2233421/35‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA < 1:2583218/35‑1 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA < 1:5078764/35‑1 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA < 1:6107096/35‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:6096957/35‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:607175/35‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:3372389/35‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:6375960/35‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:6389363/1‑35 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:3372354/35‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:272145/1‑35 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:506823/35‑1 TTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAAT < 1:4969153/35‑1 TTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA > 1:7343378/1‑35 TTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:7150113/35‑1 TTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA > 1:1250060/1‑35 TTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:3023200/35‑1 TTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:4619139/35‑1 TTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:5175621/35‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAACATAT > 1:672852/1‑35 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT < 1:1444464/35‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT > 1:7363405/1‑35 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT > 1:7691913/1‑35 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT < 1:4339694/35‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT < 1:2110365/35‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT > 1:7016523/1‑35 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT < 1:6212273/35‑1 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATA < 1:561979/35‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA > 1:2195202/1‑35 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA > 1:1002472/1‑35 AATCCTGTCGTTTGTTTTCGTTTTCAAAATATAAT > 1:7115549/1‑35 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 1:6549200/1‑35 GCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165117‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > NC_000913/2177211‑2177244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |