| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 119 [0] | [0] 125 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 119 (1.650) | 50/68 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
Only 100 of 125 total aligned reads displayed.
GCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG > NC_000913/2177177‑2177245 | gctcatactttaatcggtaaacagcacctttagaa > 1:2689561‑M2/35‑35 (MQ=255)gctcatactttaatcggtaaacagcacctttagaa < 1:4275680‑M2/1‑1 (MQ=255)gctcatactttaatcggtaaacagcacctttagaa > 1:4930455‑M2/35‑35 (MQ=255) ctcatactttaatcggtaaacagcacctttagaAt > 1:3331127‑M2/34‑35 (MQ=255) ctcatactttaatcggtaaacagcacctttagaAt > 1:2732908‑M2/34‑35 (MQ=255) ctcatactttaatcggtaaacagcacctttagaAt > 1:7523593‑M2/34‑35 (MQ=255) ctcatactttaatcggtaaacagcacctttagaAt < 1:7290294‑M2/2‑1 (MQ=255) ctcatactttaatcggtaaacagcacctttagaAt < 1:4172699‑M2/2‑1 (MQ=255) ctcatactttaatcggtaaacagcacctttagaAt > 1:2290539‑M2/34‑35 (MQ=255) ctcatactttaatcggtaaacagcacctttagaAt < 1:5302243‑M2/2‑1 (MQ=255) tcatactttaatcggtaaacagcacctttagaATc < 1:6468077‑M2/3‑1 (MQ=255) catactttaatcggtaaacagcacctttagaATcc < 1:5199180‑M2/4‑1 (MQ=255) atactttaatcggtaaacagcacctttagaATCCt > 1:4060171‑M2/31‑35 (MQ=255) atactttaatcggtaaacagcacctttagaATCCt > 1:6899790‑M2/31‑35 (MQ=255) tactttaatcggtaaacagcacctttagaATCCTg > 1:2405998‑M2/30‑35 (MQ=255) actttaatcggtaaacagcacctttagaATCCTGt < 1:411635‑M2/7‑1 (MQ=255) actttaatcggtaaacagcacctttagaATCCTGt < 1:6394146‑M2/7‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTc > 1:5495066‑M2/28‑35 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTc > 1:3120967‑M2/28‑35 (MQ=255) tttaatcggtaaacagcacctttagaATCCTGTCg < 1:5622040‑M2/9‑1 (MQ=255) tttaatcggtaaacagcacctttagaATCCTGTCg < 1:1100965‑M2/9‑1 (MQ=255) ttaatcggtaaacagcacctttagaATCCTGTCgt > 1:5276776‑M2/26‑35 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCgtt > 1:3800228‑M2/25‑35 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCgtt > 1:5330524‑M2/25‑35 (MQ=255) aatcggtaaacagcgcctttagaATCCTGTCgttt < 1:3581888‑M2/12‑1 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCgttt > 1:4410524‑M2/24‑35 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCgttt > 1:1812374‑M2/24‑35 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCgttt < 1:7145825‑M2/12‑1 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCgttt > 1:7643822‑M2/24‑35 (MQ=255) cggtaaacagcacctttagaATCCTGTCgtttgtt < 1:4772847‑M2/15‑1 (MQ=255) cggtaaacagcacctttagaATCCTGTCgtttgtt < 1:4876518‑M2/15‑1 (MQ=255) cggtaaacagcacctttagaATCCTGTCgtttgtt < 1:2106747‑M2/15‑1 (MQ=255) ggtaaacagcacctttagaATCCTGTCgtttgttt < 1:3338206‑M2/16‑1 (MQ=255) ggtaaacagcacctttagaATCCTGTCgtttgttt > 1:2287230‑M2/20‑35 (MQ=255) ggtaaacagcacctttagaATCCTGTCgtttgttt > 1:2022197‑M2/20‑35 (MQ=255) ggtaaacagcacctttagaATCCTGTCgtttgttt < 1:556939‑M2/16‑1 (MQ=255) ggtaaacagcacctttagaATCCTGTCgtttgttt < 1:3204999‑M2/16‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGtttt < 1:1291295‑M2/17‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGtttt < 1:1482044‑M2/17‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGtttt > 1:6182532‑M2/19‑35 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGtttt > 1:6062130‑M2/19‑35 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGtttt < 1:3387649‑M2/17‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGtttt < 1:1882728‑M2/17‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGtttt < 1:7788027‑M2/17‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTc > 1:1586312‑M2/18‑35 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTc < 1:6314269‑M2/18‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTc < 1:3255195‑M2/18‑1 (MQ=255) aaacagcacctttagaATCCTGTCGTTTGTTTTCg > 1:7302524‑M2/17‑35 (MQ=255) aaacagcacctttagaATCCTGTCGTTTGTTTTCg > 1:560726‑M2/17‑35 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGa < 1:7830592‑M2/20‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGa < 1:376363‑M2/20‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGa > 1:4842328‑M2/16‑35 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGa > 1:4142458‑M2/16‑35 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGa > 1:542130‑M2/16‑35 (MQ=255) acagcacctttagaATCCTGTCGTTTGTTTTCGAt < 1:662300‑M2/21‑1 (MQ=255) acagcacctttagaATCCTGTCGTTTGTTTTCGAt < 1:6394520‑M2/21‑1 (MQ=255) agcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:6252430‑M2/23‑1 (MQ=255) agcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:111051‑M2/23‑1 (MQ=255) agcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:5829989‑M2/23‑1 (MQ=255) agcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:5129118‑M2/23‑1 (MQ=255) gcacctttagaATCCTGTCGTTTGTTTTCGATTTc < 1:2233421‑M2/24‑1 (MQ=255) cacctttagaATCCTGTCGTTTGTTTTCGATTTCa < 1:2583218‑M2/25‑1 (MQ=255) acctttagaATGCTGTCGTTTGTTTTCGATTTCaa < 1:1872352‑M2/26‑1 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCaa < 1:5078764‑M2/26‑1 (MQ=255) cctttagaATCCTGTCGTTTGTTTTCGATTTCaaa > 1:135362‑M2/9‑35 (MQ=255) cctttagaATCCTGTCGTTTGTTTTCGATTTCaaa < 1:6096957‑M2/27‑1 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:3372354‑M2/28‑1 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:506823‑M2/28‑1 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:6389363‑M2/8‑35 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:272145‑M2/8‑35 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:607175‑M2/28‑1 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:3372389‑M2/28‑1 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:2141716‑M2/28‑1 (MQ=255) tttagaATCCTGTCGTTTGTTTTCGATTTCAAAat < 1:4969153‑M2/29‑1 (MQ=255) ttagaATCCTGTCGTTTGTTTTCGATTTCAAAata < 1:5175621‑M2/30‑1 (MQ=255) ttagaATCCTGTCGTTTGTTTTCGATTTCAAAata > 1:7343378‑M2/6‑35 (MQ=255) ttagaATCCTGTCGTTTGTTTTCGATTTCAAAata > 1:1250060‑M2/6‑35 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAACatat > 1:672852‑M2/5‑35 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAatat > 1:3508428‑M2/5‑35 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAatat > 1:7363405‑M2/5‑35 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAatat > 1:7288042‑M2/5‑35 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAatat > 1:7691913‑M2/5‑35 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAatat < 1:452320‑M2/31‑1 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAatat > 1:7016523‑M2/5‑35 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAatat < 1:1444464‑M2/31‑1 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAatat < 1:6212273‑M2/31‑1 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAatat < 1:4339694‑M2/31‑1 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAatat < 1:2110365‑M2/31‑1 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 1:302098‑M2/32‑1 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAAtata > 1:517534‑M2/4‑35 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 1:561979‑M2/32‑1 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 1:7395479‑M2/32‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa < 1:2458106‑M2/33‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa > 1:1002472‑M2/3‑35 (MQ=255) aATCCTGTCGTTTGTTTTCGTTTTCAAAATATAAt > 1:7115549‑M2/2‑35 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt > 1:6549200‑M2/2‑35 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCGAAATATAATg > 1:2357702/1‑35 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:6775498/35‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:7157408/35‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:2305396/35‑1 (MQ=255) | GCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG > NC_000913/2177177‑2177245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |