| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,320,144 | Δ16,489 bp | [atoS]–[yfaA] | [atoS], atoC, atoD, atoA, atoE, atoB, yfaP, yfaQ, yfaS, yfaT, [yfaA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2320144 | 2336632 | 16489 | 110 [0] | [0] 108 | [atoS]–[yfaA] | [atoS],atoC,atoD,atoA,atoE,atoB,yfaP,yfaQ,yfaS,yfaT,[yfaA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2320143 | 0 (0.000) | 99 (1.410) | 45/66 | 0.0 | 100% | coding (101/1827 nt) | atoS | sensory histidine kinase AtoS |
| ? | NC_000913 | 2336633 = | 0 (0.000) | coding (12/1689 nt) | yfaA | DUF2138 domain‑containing protein YfaA | |||||
Only 100 of 110 total aligned reads displayed.
ATGGTCATTGTCCCAACGCTTACTATTGGTTATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2320109‑2320143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTTCACCACTCATTGCCACATTCCTTGTGTATAGC > NC_000913/2336633‑2336666 ATGGTCATTGTCCCAACGCTTACTATTGGTTATAT < 1:943788/35‑1ATGGTCATTGTCCCAACGCTTACTATTGGTTATAT > 1:1067157/1‑35ATGGTCATTGTCCCAACGCTTACTATTGGTTATAT > 1:3075739/1‑35ATGGTCATTGTCCCAACGCTTACTATTGGTTATAT < 1:1253615/35‑1ATGGTCATTGTCCCAACGCTTACTATTGGTTATAT > 1:448784/1‑35 TGGTCATTGTCCCAACGCTTACTATTGGTTATATT < 1:1561996/35‑1 GGTCATTGTCCCAACGCTTACTATTGGTTATATTT < 1:2335263/35‑1 GGTCATTGTCCCAACGCTTACTATTGGTTATATTT < 1:2590924/35‑1 GGTCATTGTCCCAACGCTTACTATTGGTTATATTT > 1:3646565/1‑35 GGTCATTGTCCCAACGCTTACTATTGGTTATATTT < 1:4529193/35‑1 GGTCATTGTCCCAACGCTTACTATTGGTTATATTT < 1:7335419/35‑1 GTCATTGTCCCAACGCTTACTATTGGTTATATTTC > 1:1359578/1‑35 GTCATTGTCCCAACGCTTACTATTGGTTATATTTC > 1:5429243/1‑35 GTCATTGTCCCAACGCTTACTATTGGTTATATTTC > 1:7152778/1‑35 GTCATTGTCCCAACGCTTACTATTGGTTATATTTC > 1:1740651/1‑35 GTCATTGTCCCAACGCTTACTATTGGTTATATTTC > 1:7465849/1‑35 TCATTGTCCCAACGCTTACTATTGGTTATATTTCA > 1:5119255/1‑35 TCATTGTCCCAACGCTTACTATTGGTTATATTTCA < 1:1036568/35‑1 TCATTGTCCCAACGCTTACTATTGGTTATATTTCA < 1:1184627/35‑1 CATTGTCCCAACGCTTACTATTGGTTATATTTCAC < 1:3639048/35‑1 CATTGTCCCAACGCTTACTATTGGTTATATTTCAC > 1:4679066/1‑35 CATTGTCCCAACGCTTACTATTGGTTATATTTCAC < 1:5679591/35‑1 ATTGTCCCAACGCTTACTATTGGTTATATTTCACC > 1:71069/1‑35 TTGTCCCAACGCTTACTATTGGTTATATTTCACCA > 1:1146528/1‑35 TTGTCCCAACGCTTACTATTGGTTATATTTCACCA < 1:5973566/35‑1 TTGTCCCAACGCTTACTATTGGTTATATTTCACCA < 1:6081885/35‑1 TTGTCCCAACGCTTACTATTGGTTATATTTCACCA > 1:6890957/1‑35 TTGTCCCAACGCTTACTATTGGTTATATTTCACCA < 1:7452560/35‑1 TTGTCCCAACGCTTACTATTGGTTATATTTCACCA > 1:1345220/1‑35 TTGTCCCAACGCTTACTATTGGTTATATTTCACCA > 1:4967277/1‑35 TGTCCCAACGCTTACTATTGGTTATATTTCACCAC < 1:4097980/35‑1 GTCCCAACGCTTACTATTGGTTATATTTCACCACT > 1:2948213/1‑35 GTCCCAACGCTTACTATTGGTTATATTTCACCACT < 1:2901875/35‑1 GTCCCAACGCTTACTATTGGTTATATTTCACCACT < 1:3458684/35‑1 CCCAACGCTTACTATTGGTTATATTTCACCACTCA < 1:6786187/35‑1 CCCAACGCTTACTATTGGTTATATTTCACCACTCA < 1:619794/35‑1 CCCAACGCTTACTATTGGTTATATTTCACCACTCA < 1:4472224/35‑1 CCAACGCTTACTATTGGTTATATTTCACCACTCAT < 1:5769496/35‑1 CCAACGCTTACTATTGGTTATATTTCACCACTCAT < 1:7043966/35‑1 CCAACGCTTACTATTGGTTATATTTCACCACTCAT > 1:7788012/1‑35 CAACGCTTACTATTGGTTATATTTCACCACTCATT < 1:101501/35‑1 CAACGCTTACTATTGGTTATATTTCACCACTCATT < 1:4219218/35‑1 CAACGCTTACTATTGGTTATATTTCACCACTCATT < 1:1867804/35‑1 AACGCTTACTATTGGTTATATTTCACCACTCATTG < 1:7565841/35‑1 AACGCTTACTATTGGTTATATTTCACCACTCATTG < 1:3812792/35‑1 ACGCTTACTATTGGTTATATTTCACCACTCATTGC > 1:363091/1‑35 ACGCTTACTATTGGTTATATTTCACCACTCATTGC < 1:2632893/35‑1 CGCTTACTATTGGTTATATTTCACCACTCATTGCC < 1:5516307/35‑1 CGCTTACTATTGGTTATATTTCACCACTCATTGCC > 1:2070011/1‑35 GCTTACTATTGGTTATATTTCACCACTCATTGCCA > 1:2745661/1‑35 GCTTACTATTGGTTATATTTCACCACTCATTGCCA < 1:7686707/35‑1 TTACTATTGGTTATATTTCACCACTCATTGCCACA < 1:4393795/35‑1 TACTATTGGTTATATTTCACCACTCATTGCCACAT < 1:7776399/35‑1 TACTATTGGTTATATTTCACCACTCATTGCCACAT < 1:2104980/35‑1 ACTATTGGTTATATTTCACCACTCATTGCCACATT < 1:6854332/35‑1 ACTATTGGTTATATTTCACCACTCATTGCCACATT < 1:413425/35‑1 ACTATTGGTTATATTTCACCACTCATTGCCACATT < 1:7734554/35‑1 ACTATTGGTTATATTTCACCACTCATTGCCACATT > 1:5950422/1‑35 ACTATTGGTTATATTTCACCACTCATTGCCACATT > 1:304211/1‑35 CTATTGGTTATATTTCACCACTCATTGCCACATTC > 1:871592/1‑35 CTATTGGTTATATTTCACCACTCATTGCCACATTC > 1:2488392/1‑35 CTATTGGTTATATTTCACCACTCATTGCCACATTC < 1:173435/35‑1 TATTGGTTATATTTCACCACTCATTGCCACATTCC < 1:2075072/35‑1 TATTGGTTATATTTCACCACTCATTGCCACATTCC > 1:6846309/1‑35 TATTGGTTATATTTCACCACTCATTGCCACATTCC > 1:5964416/1‑35 TATTGGTTATATTTCACCACTCATTGCCACATTCC > 1:2936220/1‑35 TATTGGTTATATTTCACCACTCATTGCCACATTCC < 1:332347/35‑1 TATTGGTTATATTTCACCACTCATTGCCACATTCC < 1:1165460/35‑1 TTGGTTATATTTCACCACTCATTGCCACATTCCTT > 1:5271237/1‑35 TTGGTTATATTTCACCACTCATTGCCACATTCCTT < 1:5022694/35‑1 TGGTTATATTTCACCACTCATTGCCACATTCCTTG < 1:5234959/35‑1 TGGTTATATTTCACCACTCATTGCCACATTCCTTG < 1:166318/35‑1 TGGTTATATTTCACCACTCATTGCCACATTCCTTG < 1:6015733/35‑1 GTTATATTTCCCCACTCATTGCCACATTCCTTGTG < 1:2384711/35‑1 GTTATATTTCACCACTCATTGCCACATTCCTTGTG < 1:1305431/35‑1 GTTATATTTCACCACTCATTGCCACATTCCTTGTG < 1:6236031/35‑1 TTATATTTCACCACTCATTGCCACATTCCTTGTGT > 1:3110640/1‑35 TTATATTTCACCACTCATTGCCACATTCCTTGTGT > 1:432252/1‑35 TATATTTCACCACTCATTGCCACATTCCTTGTGTA < 1:43901/35‑1 TATATTTCACCACTCATTGCCACATTCCTTGTGTA < 1:2610081/35‑1 TATATTTCACCACTCATTGCCACATTCCTTGTGTA < 1:3375285/35‑1 TATATTTCACCACTCATTGCCACATTCCTTGTGTA < 1:3385389/35‑1 TATATTTCACCACTCATTGCCACATTCCTTGTGTA < 1:3815903/35‑1 TATATTTCACCACTCATTGCCACATTCCTTGTGTA < 1:5105383/35‑1 TATATTTCACCACTCATTGCCACATTCCTTGTGTA < 1:5105299/35‑1 ATATTTCACCACTCATTGCCACATTCCTTGTGTAT > 1:3663710/1‑35 ATATTTCACCACTCATTGCCACATTCCTTGTGTAT < 1:693021/35‑1 ATATTTCACCACTCATTGCCACATTCCTTGTGTAT > 1:311378/1‑35 ATATTTCACCACTCATTGCCACATTCCTTGTGTAT < 1:3712397/35‑1 ATATTTCACCACTCATTGCCACATTCCTTGTGTAT > 1:6617672/1‑35 ATATTTCACCACTCATTGCCACATTCCTTGTGTAT < 1:525505/35‑1 ATATTTCACCACTCATTGCCACATTCCTTGTGTAT > 1:4786265/1‑35 TATTTCACCACTCATTGCCACATTCCTTGTGTATA < 1:3533847/35‑1 TATTTCACCACTCATTGCCACATTCCTTGTGTATA > 1:1613300/1‑35 ATTTCACCACTCATTACCACATTCCTTGTGTATAG > 1:6939264/1‑35 TTTCACCACTCATTGCCACATTCCTTGTGTATAGC < 1:4428039/35‑1 TTTCACCACTCATTGCCACATTCCTTGTGTATAGC < 1:1543096/35‑1 TTTCACCACTCATTGCCACATTCCTTGTGTATAGC < 1:4043332/35‑1 TTTCACCACTCATTGCCACATTCCTTGTGTATAGC > 1:5679540/1‑35 TTTCACCACTCATTGCCACATTCCTTGTGTATAGC < 1:3093360/35‑1 ATGGTCATTGTCCCAACGCTTACTATTGGTTATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2320109‑2320143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTTCACCACTCATTGCCACATTCCTTGTGTATAGC > NC_000913/2336633‑2336666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |