| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,320,144 | Δ16,489 bp | [atoS]–[yfaA] | [atoS], atoC, atoD, atoA, atoE, atoB, yfaP, yfaQ, yfaS, yfaT, [yfaA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2320144 | 2336632 | 16489 | 110 [0] | [0] 108 | [atoS]–[yfaA] | [atoS],atoC,atoD,atoA,atoE,atoB,yfaP,yfaQ,yfaS,yfaT,[yfaA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2320143 | 0 (0.000) | 99 (1.410) | 45/66 | 0.0 | 100% | coding (101/1827 nt) | atoS | sensory histidine kinase AtoS |
| ? | NC_000913 | 2336633 = | 0 (0.000) | coding (12/1689 nt) | yfaA | DUF2138 domain‑containing protein YfaA | |||||
Only 100 of 110 total aligned reads displayed.
ATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCT > NC_000913/2320109‑2320177 | aTGGTCATTGTCCCAACGCTTACTATTGGTTATAT < 1:943788‑M1/35‑1 (MQ=255)aTGGTCATTGTCCCAACGCTTACTATTGGTTATAT > 1:1067157‑M1/1‑35 (MQ=255)aTGGTCATTGTCCCAACGCTTACTATTGGTTATAT > 1:3075739‑M1/1‑35 (MQ=255)aTGGTCATTGTCCCAACGCTTACTATTGGTTATAT < 1:1253615‑M1/35‑1 (MQ=255)aTGGTCATTGTCCCAACGCTTACTATTGGTTATAT > 1:448784‑M1/1‑35 (MQ=255) tGGTCATTGTCCCAACGCTTACTATTGGTTATATt < 1:1561996‑M1/35‑2 (MQ=255) ggTCATTGTCCCAACGCTTACTATTGGTTATATtt < 1:2335263‑M1/35‑3 (MQ=255) ggTCATTGTCCCAACGCTTACTATTGGTTATATtt < 1:2590924‑M1/35‑3 (MQ=255) ggTCATTGTCCCAACGCTTACTATTGGTTATATtt > 1:3646565‑M1/1‑33 (MQ=255) ggTCATTGTCCCAACGCTTACTATTGGTTATATtt < 1:4529193‑M1/35‑3 (MQ=255) ggTCATTGTCCCAACGCTTACTATTGGTTATATtt < 1:7335419‑M1/35‑3 (MQ=255) gTCATTGTCCCAACGCTTACTATTGGTTATATttc > 1:1359578‑M1/1‑32 (MQ=255) gTCATTGTCCCAACGCTTACTATTGGTTATATttc > 1:5429243‑M1/1‑32 (MQ=255) gTCATTGTCCCAACGCTTACTATTGGTTATATttc > 1:7152778‑M1/1‑32 (MQ=255) gTCATTGTCCCAACGCTTACTATTGGTTATATttc > 1:1740651‑M1/1‑32 (MQ=255) gTCATTGTCCCAACGCTTACTATTGGTTATATttc > 1:7465849‑M1/1‑32 (MQ=255) tCATTGTCCCAACGCTTACTATTGGTTATATttca > 1:5119255‑M1/1‑31 (MQ=255) tCATTGTCCCAACGCTTACTATTGGTTATATttca < 1:1036568‑M1/35‑5 (MQ=255) tCATTGTCCCAACGCTTACTATTGGTTATATttca < 1:1184627‑M1/35‑5 (MQ=255) cATTGTCCCAACGCTTACTATTGGTTATATttcac < 1:3639048‑M1/35‑6 (MQ=255) cATTGTCCCAACGCTTACTATTGGTTATATttcac > 1:4679066‑M1/1‑30 (MQ=255) cATTGTCCCAACGCTTACTATTGGTTATATttcac < 1:5679591‑M1/35‑6 (MQ=255) aTTGTCCCAACGCTTACTATTGGTTATATttcacc > 1:71069‑M1/1‑29 (MQ=255) ttGTCCCAACGCTTACTATTGGTTATATttcacca > 1:1146528‑M1/1‑28 (MQ=255) ttGTCCCAACGCTTACTATTGGTTATATttcacca < 1:5973566‑M1/35‑8 (MQ=255) ttGTCCCAACGCTTACTATTGGTTATATttcacca < 1:6081885‑M1/35‑8 (MQ=255) ttGTCCCAACGCTTACTATTGGTTATATttcacca > 1:6890957‑M1/1‑28 (MQ=255) ttGTCCCAACGCTTACTATTGGTTATATttcacca < 1:7452560‑M1/35‑8 (MQ=255) ttGTCCCAACGCTTACTATTGGTTATATttcacca > 1:1345220‑M1/1‑28 (MQ=255) ttGTCCCAACGCTTACTATTGGTTATATttcacca > 1:4967277‑M1/1‑28 (MQ=255) tGTCCCAACGCTTACTATTGGTTATATttcaccac < 1:4097980‑M1/35‑9 (MQ=255) gTCCCAACGCTTACTATTGGTTATATttcaccact > 1:2948213‑M1/1‑26 (MQ=255) gTCCCAACGCTTACTATTGGTTATATttcaccact < 1:2901875‑M1/35‑10 (MQ=255) gTCCCAACGCTTACTATTGGTTATATttcaccact < 1:3458684‑M1/35‑10 (MQ=255) cccAACGCTTACTATTGGTTATATttcaccactca < 1:6786187‑M1/35‑12 (MQ=255) cccAACGCTTACTATTGGTTATATttcaccactca < 1:619794‑M1/35‑12 (MQ=255) cccAACGCTTACTATTGGTTATATttcaccactca < 1:4472224‑M1/35‑12 (MQ=255) ccAACGCTTACTATTGGTTATATttcaccactcat < 1:5769496‑M1/35‑13 (MQ=255) ccAACGCTTACTATTGGTTATATttcaccactcat < 1:7043966‑M1/35‑13 (MQ=255) ccAACGCTTACTATTGGTTATATttcaccactcat > 1:7788012‑M1/1‑23 (MQ=255) cAACGCTTACTATTGGTTATATttcaccactcatt < 1:101501‑M1/35‑14 (MQ=255) cAACGCTTACTATTGGTTATATttcaccactcatt < 1:4219218‑M1/35‑14 (MQ=255) cAACGCTTACTATTGGTTATATttcaccactcatt < 1:1867804‑M1/35‑14 (MQ=255) aaCGCTTACTATTGGTTATATttcaccactcattg < 1:7565841‑M1/35‑15 (MQ=255) aaCGCTTACTATTGGTTATATttcaccactcattg < 1:3812792‑M1/35‑15 (MQ=255) aCGCTTACTATTGGTTATATttcaccactcattgc > 1:363091‑M1/1‑20 (MQ=255) aCGCTTACTATTGGTTATATttcaccactcattgc < 1:2632893‑M1/35‑16 (MQ=255) cGCTTACTATTGGTTATATttcaccactcattgcc < 1:5516307‑M1/35‑17 (MQ=255) cGCTTACTATTGGTTATATttcaccactcattgcc > 1:2070011‑M1/1‑19 (MQ=255) gCTTACTATTGGTTATATttcaccactcattgcca > 1:2745661‑M1/1‑18 (MQ=255) gCTTACTATTGGTTATATttcaccactcattgcca < 1:7686707‑M1/35‑18 (MQ=255) ttACTATTGGTTATATttcaccactcattgccaca < 1:4393795‑M1/35‑20 (MQ=255) tACTATTGGTTATATttcaccactcattgccacat < 1:7776399‑M1/35‑21 (MQ=255) tACTATTGGTTATATttcaccactcattgccacat < 1:2104980‑M1/35‑21 (MQ=255) aCTATTGGTTATATttcaccactcattgccacatt < 1:6854332‑M1/35‑22 (MQ=255) aCTATTGGTTATATttcaccactcattgccacatt < 1:413425‑M1/35‑22 (MQ=255) aCTATTGGTTATATttcaccactcattgccacatt < 1:7734554‑M1/35‑22 (MQ=255) aCTATTGGTTATATttcaccactcattgccacatt > 1:5950422‑M1/1‑14 (MQ=255) aCTATTGGTTATATttcaccactcattgccacatt > 1:304211‑M1/1‑14 (MQ=255) cTATTGGTTATATttcaccactcattgccacattc > 1:871592‑M1/1‑13 (MQ=255) cTATTGGTTATATttcaccactcattgccacattc > 1:2488392‑M1/1‑13 (MQ=255) cTATTGGTTATATttcaccactcattgccacattc < 1:173435‑M1/35‑23 (MQ=255) tATTGGTTATATttcaccactcattgccacattcc < 1:2075072‑M1/35‑24 (MQ=255) tATTGGTTATATttcaccactcattgccacattcc > 1:6846309‑M1/1‑12 (MQ=255) tATTGGTTATATttcaccactcattgccacattcc > 1:5964416‑M1/1‑12 (MQ=255) tATTGGTTATATttcaccactcattgccacattcc > 1:2936220‑M1/1‑12 (MQ=255) tATTGGTTATATttcaccactcattgccacattcc < 1:332347‑M1/35‑24 (MQ=255) tATTGGTTATATttcaccactcattgccacattcc < 1:1165460‑M1/35‑24 (MQ=255) ttGGTTATATttcaccactcattgccacattcctt > 1:5271237‑M1/1‑10 (MQ=255) ttGGTTATATttcaccactcattgccacattcctt < 1:5022694‑M1/35‑26 (MQ=255) tGGTTATATttcaccactcattgccacattccttg < 1:5234959‑M1/35‑27 (MQ=255) tGGTTATATttcaccactcattgccacattccttg < 1:166318‑M1/35‑27 (MQ=255) tGGTTATATttcaccactcattgccacattccttg < 1:6015733‑M1/35‑27 (MQ=255) gTTATATttccccactcattgccacattccttgtg < 1:2384711‑M1/35‑29 (MQ=255) gTTATATttcaccactcattgccacattccttgtg < 1:1305431‑M1/35‑29 (MQ=255) gTTATATttcaccactcattgccacattccttgtg < 1:6236031‑M1/35‑29 (MQ=255) ttATATttcaccactcattgccacattccttgtgt > 1:3110640‑M1/1‑6 (MQ=255) ttATATttcaccactcattgccacattccttgtgt > 1:432252‑M1/1‑6 (MQ=255) tataTttcaccactcattgccacattccttgtgta < 1:43901‑M1/35‑31 (MQ=255) tataTttcaccactcattgccacattccttgtgta < 1:2610081‑M1/35‑31 (MQ=255) tataTttcaccactcattgccacattccttgtgta < 1:3375285‑M1/35‑31 (MQ=255) tataTttcaccactcattgccacattccttgtgta < 1:3385389‑M1/35‑31 (MQ=255) tataTttcaccactcattgccacattccttgtgta < 1:3815903‑M1/35‑31 (MQ=255) tataTttcaccactcattgccacattccttgtgta < 1:5105383‑M1/35‑31 (MQ=255) tataTttcaccactcattgccacattccttgtgta < 1:5105299‑M1/35‑31 (MQ=255) atatttcaccactcattgccacattccttgtgtat > 1:3663710‑M1/1‑4 (MQ=255) atatttcaccactcattgccacattccttgtgtat < 1:693021‑M1/35‑32 (MQ=255) atatttcaccactcattgccacattccttgtgtat > 1:311378‑M1/1‑4 (MQ=255) atatttcaccactcattgccacattccttgtgtat < 1:3712397‑M1/35‑32 (MQ=255) atatttcaccactcattgccacattccttgtgtat > 1:6617672‑M1/1‑4 (MQ=255) atatttcaccactcattgccacattccttgtgtat < 1:525505‑M1/35‑32 (MQ=255) atatttcaccactcattgccacattccttgtgtat > 1:4786265‑M1/1‑4 (MQ=255) tatttcaccactcattgccacattccttgtgtata < 1:3533847‑M1/35‑33 (MQ=255) tatttcaccactcattgccacattccttgtgtata > 1:1613300‑M1/1‑3 (MQ=255) atttcaccactcattaccacattccttgtgtatag > 1:6939264‑M1/1‑2 (MQ=255) tttcaccactcattgccacattccttgtgtatagc < 1:4428039‑M1/35‑35 (MQ=255) tttcaccactcattgccacattccttgtgtatagc < 1:1543096‑M1/35‑35 (MQ=255) tttcaccactcattgccacattccttgtgtatagc < 1:4043332‑M1/35‑35 (MQ=255) tttcaccactcattgccacattccttgtgtatagc > 1:5679540‑M1/1‑1 (MQ=255) tttcaccactcattgccacattccttgtgtatagc < 1:3093360‑M1/35‑35 (MQ=255) | ATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCT > NC_000913/2320109‑2320177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |